Protein Alignment sna and snai-1

DIOPT Version :10

• Sequence 1: NP_476732.1
• Gene: sna / 34908
• FlyBaseID: FBgn0003448
• Length: 390
• Species: Drosophila melanogaster
• Sequence 2: NP_499902.2
• Gene: snai-1 / 186874
• WormBaseID: WBGene00019299
• Length: 193
• Species: Caenorhabditis elegans
• Alignment Length: 155
• Identity: 81/155 - (52%)
• Similarity: 103/155 - (66%)
• Gaps: 6/155 - (3%)

  Fly   226 PAMSASSASVAANHAKNYRFKCDECQKMYSTSMGLSKHRQFHCPAAECNQEKKTHSCEECGKLYT 290
            ||.|:||:|.:.:...|.:..|..|:|.|.|..||.:|.|||      .:.|...||..|.|:|.
 Worm    22 PAPSSSSSSASCSSLDNQKLVCQFCKKTYLTYFGLRRHLQFH------KEGKLQQSCPHCKKVYR 80

  Fly   291 TIGALKMHIRTHTLPCKCPICGKAFSRPWLLQGHIRTHTGEKPFQCPDCPRSFADRSNLRAHQQT 355
            :.||||||::||:|||.|..|||:|||||||:||:|||||||||.|..|.|.||||||||||.||
 Worm    81 SPGALKMHLKTHSLPCVCNDCGKSFSRPWLLKGHLRTHTGEKPFGCEFCGRCFADRSNLRAHLQT 145

  Fly   356 HVDVKKYACQVCHKSFSRMSLLNKH 380
            |...||:.|..|.:||:|:.:..:|
 Worm   146 HSGEKKHRCSRCGQSFARVQVRQRH 170

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sna	NP_476732.1	SFP1	<245..303	CDD:227516	24/57 (42%)
		C2H2 Zn finger	247..267	CDD:275368	9/19 (47%)
		C2H2 Zn finger	282..302	CDD:275368	10/19 (53%)
		zf-C2H2	306..328	CDD:395048	15/21 (71%)
		C2H2 Zn finger	308..328	CDD:275368	14/19 (74%)
		zf-H2C2_2	321..344	CDD:463886	15/22 (68%)
		zf-C2H2	334..356	CDD:395048	15/21 (71%)
		C2H2 Zn finger	336..356	CDD:275368	14/19 (74%)
		zf-H2C2_2	348..373	CDD:463886	14/24 (58%)
		C2H2 Zn finger	364..380	CDD:275368	5/15 (33%)
snai-1	NP_499902.2	C2H2 Zn finger	72..92	CDD:275368	10/19 (53%)
		COG5048	98..>155	CDD:227381	40/56 (71%)
		C2H2 Zn finger	98..118	CDD:275368	14/19 (74%)
		C2H2 Zn finger	126..146	CDD:275368	14/19 (74%)
		C2H2 Zn finger	154..170	CDD:275368	5/15 (33%)