Protein Alignment sna and scrt-1

DIOPT Version :10

• Sequence 1: NP_476732.1
• Gene: sna / 34908
• FlyBaseID: FBgn0003448
• Length: 390
• Species: Drosophila melanogaster
• Sequence 2: NP_491001.2
• Gene: scrt-1 / 183848
• WormBaseID: WBGene00016948
• Length: 178
• Species: Caenorhabditis elegans
• Alignment Length: 191
• Identity: 70/191 - (36%)
• Similarity: 92/191 - (48%)
• Gaps: 56/191 - (29%)

  Fly   195 IPLPALFHLFDEAKSSSSGASVSSSSGYSYTPAMSASSASVAANHAKNYRFKCDECQKMYSTSMG 259
            ||:|.|       .:|||..|:.|.|.:|.:|::|.|:...:                 |||
 Worm    39 IPIPYL-------PASSSSPSLPSFSLHSDSPSLSPSTTVTS-----------------YST--- 76

  Fly   260 LSKHRQFHCPAAECNQEKKTHSCEECGKLYTTIGALKMHIRTHTLPCKCPICGKAFSRPWLLQGH 324
                     |::...::.|..:|...                    |:|.:|||.|||.||||||
 Worm    77 ---------PSSPDGKQLKFATCSPV--------------------CQCKVCGKRFSRQWLLQGH 112

  Fly   325 IRTHTGEKPFQCPDCPRSFADRSNLRAHQQTHVDVKKYACQVCHKSFSRMSLLNKHSSSNC 385
            :|||||||||||..|.:.|||:||||||.|||...|.:.|..|.|||:..|.|:||..|.|
 Worm   113 LRTHTGEKPFQCEICSKRFADKSNLRAHIQTHSGTKPHKCPRCGKSFALKSYLSKHEESKC 173

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sna	NP_476732.1	SFP1	<245..303	CDD:227516	6/57 (11%)
		C2H2 Zn finger	247..267	CDD:275368	3/19 (16%)
		C2H2 Zn finger	282..302	CDD:275368	1/19 (5%)
		zf-C2H2	306..328	CDD:395048	15/21 (71%)
		C2H2 Zn finger	308..328	CDD:275368	14/19 (74%)
		zf-H2C2_2	321..344	CDD:463886	16/22 (73%)
		zf-C2H2	334..356	CDD:395048	14/21 (67%)
		C2H2 Zn finger	336..356	CDD:275368	12/19 (63%)
		zf-H2C2_2	348..373	CDD:463886	14/24 (58%)
		C2H2 Zn finger	364..380	CDD:275368	7/15 (47%)
scrt-1	NP_491001.2	zf-C2H2	94..116	CDD:395048	15/21 (71%)
		C2H2 Zn finger	96..116	CDD:275368	14/19 (74%)
		zf-H2C2_2	109..132	CDD:463886	16/22 (73%)
		C2H2 Zn finger	124..144	CDD:275368	12/19 (63%)
		zf-H2C2_2	136..160	CDD:463886	13/23 (57%)
		C2H2 Zn finger	152..168	CDD:275368	7/15 (47%)