Sequence 1: | NP_476732.1 | Gene: | sna / 34908 | FlyBaseID: | FBgn0003448 | Length: | 390 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_493611.2 | Gene: | klu-1 / 173366 | WormBaseID: | WBGene00013970 | Length: | 543 | Species: | Caenorhabditis elegans |
Alignment Length: | 321 | Identity: | 86/321 - (26%) |
---|---|---|---|
Similarity: | 125/321 - (38%) | Gaps: | 62/321 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 43 DLSLKRGRDEETQDYQQPEPKRDYVLNLSKTPERNSSSSSNSCLLSPPVEAQDYLPTEIHMRGLT 107
Fly 108 AGTTGYTTATPTTINPFQSAFVMAAGCNPISALWSSYQPHLAAFPSPASSMASPQSVYSYQQMTP 172
Fly 173 PSSPGSDLETGSEPEDLSVRNDIPLPALFHLFDEAKSSSSGASVSSSSGYSYTPAMSASSASVAA 237
Fly 238 NHAKNYRFKCDECQKMYSTSMGL-----SKHRQFHCPAAECNQEKKTHSCEECGKLYTTIGALKM 297
Fly 298 HIRTHT--LPCKCPICGKAFSRPWLLQGHIRTHTGEKPFQCPDCPRSFADRSNLRAHQQTH 356 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sna | NP_476732.1 | C2H2 Zn finger | 308..328 | CDD:275368 | 9/19 (47%) |
zf-H2C2_2 | 321..344 | CDD:290200 | 14/22 (64%) | ||
zf-C2H2 | 334..356 | CDD:278523 | 6/21 (29%) | ||
C2H2 Zn finger | 336..356 | CDD:275368 | 6/19 (32%) | ||
zf-H2C2_2 | 348..373 | CDD:290200 | 3/9 (33%) | ||
C2H2 Zn finger | 364..380 | CDD:275368 | |||
C2H2 Zn finger | 247..267 | CDD:275368 | 7/24 (29%) | ||
C2H2 Zn finger | 282..302 | CDD:275368 | 6/19 (32%) | ||
zf-C2H2 | 306..328 | CDD:278523 | 9/21 (43%) | ||
COG5048 | 307..>356 | CDD:227381 | 22/48 (46%) | ||
klu-1 | NP_493611.2 | C2H2 Zn finger | 334..354 | CDD:275368 | 3/19 (16%) |
zf-C2H2 | 369..391 | CDD:278523 | 7/21 (33%) | ||
C2H2 Zn finger | 371..391 | CDD:275368 | 6/19 (32%) | ||
zf-H2C2_2 | 383..408 | CDD:290200 | 10/24 (42%) | ||
COG5048 | 395..>448 | CDD:227381 | 25/53 (47%) | ||
C2H2 Zn finger | 399..419 | CDD:275368 | 9/19 (47%) | ||
zf-H2C2_2 | 411..436 | CDD:290200 | 14/24 (58%) | ||
C2H2 Zn finger | 427..447 | CDD:275368 | 6/19 (32%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S4280 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.950 |