DRSC/TRiP Functional Genomics Resources

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Protein Alignment sna and Egr3

DIOPT Version :10

Sequence 1:NP_476732.1 Gene:sna / 34908 FlyBaseID:FBgn0003448 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_061251.1 Gene:Egr3 / 13655 MGIID:1306780 Length:387 Species:Mus musculus


Alignment Length:409 Identity:87/409 - (21%)
Similarity:139/409 - (33%) Gaps:122/409 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ERLPQTEALALTK--DSQFAQDQPQDLSLKRGRDEETQDYQQ---------------PEPKRDYV 67
            |:||.|.:..|.:  |:.:.::.|..|:|..|..:....|.|               |.|:..|.
Mouse     7 EKLPVTMSSLLNQLPDNLYPEEIPSALNLFSGSSDSVAHYNQMATENVMDIGLTNEKPNPELSYS 71

  Fly    68 LNLSKTPERNS---------SSSSNSC------LLS------PPVEAQDYLPTEIHMRGLTAGTT 111
            .:....|...:         .|.||.|      |:|      ||                .:|..
Mouse    72 SSFQPAPGNKTVTYLGKFAFDSPSNWCQDNIISLMSAGILGVPP----------------ASGAL 120

  Fly   112 GYTTATPTTINPFQSAFVMAAGCNPISALWSSYQPHL---------AAFPSPASSMASPQSVYSY 167
            ...|:|.:.:.|.|         ..:.|::.:..|:.         .:|..|..:.....|...|
Mouse   121 STQTSTASMVQPPQ---------GDVEAMYPALPPYSNCGDLYSEPVSFHDPQGNPGLAYSPQDY 176

  Fly   168 QQMTP-------PSSPGSDL-----ETGSEPEDLSVRNDIPL----PALFHLFDEAKSSSSGASV 216
            |...|       |..|..:|     :.||.||....:...|:    |.:..|  |...:.....:
Mouse   177 QSAKPALDSNLFPMIPDYNLYHHPNDMGSIPEHKPFQGMDPIRVNPPPITPL--ETIKAFKDKQI 239

  Fly   217 SSSSGYSYTPAMSASSASVAANHAKNYRFKCDECQKMYSTSMGLSKHRQFHCPAAECNQEKKTHS 281
            ....|....|.::....                            :.|::....::....::.|:
Mouse   240 HPGFGSLPQPPLTLKPI----------------------------RPRKYPNRPSKTPLHERPHA 276

  Fly   282 C--EECGKLYTTIGALKMHIRTHT--LPCKCPICGKAFSRPWLLQGHIRTHTGEKPFQCPDCPRS 342
            |  |.|.:.::....|..|:|.||  .|.:|.||.::|||...|..|||||||||||.|..|.|.
Mouse   277 CPAEGCDRRFSRSDELTRHLRIHTGHKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFACEFCGRK 341

  Fly   343 FADRSNLRAHQQTHVDVKK 361
            ||.....:.|.:.|:..|:
Mouse   342 FARSDERKRHAKIHLKQKE 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snaNP_476732.1 SFP1 <245..303 CDD:227516 8/59 (14%)
C2H2 Zn finger 247..267 CDD:275368 1/19 (5%)
C2H2 Zn finger 282..302 CDD:275368 6/21 (29%)
zf-C2H2 306..328 CDD:395048 10/21 (48%)
C2H2 Zn finger 308..328 CDD:275368 10/19 (53%)
zf-H2C2_2 321..344 CDD:463886 15/22 (68%)
zf-C2H2 334..356 CDD:395048 7/21 (33%)
C2H2 Zn finger 336..356 CDD:275368 6/19 (32%)
zf-H2C2_2 348..373 CDD:463886 3/14 (21%)
C2H2 Zn finger 364..380 CDD:275368
Egr3NP_061251.1 DUF3446 87..173 CDD:463400 17/110 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 241..283 6/69 (9%)
zf-C2H2 275..299 CDD:395048 7/23 (30%)
C2H2 Zn finger 277..299 CDD:275368 6/21 (29%)
COG5048 303..>375 CDD:227381 27/58 (47%)
C2H2 Zn finger 307..327 CDD:275368 10/19 (53%)
zf-H2C2_2 319..344 CDD:463886 16/24 (67%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 348..387 3/13 (23%)
Blue background indicates that the domain is not in the aligned region.

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