Sequence 1: | NP_476732.1 | Gene: | sna / 34908 | FlyBaseID: | FBgn0003448 | Length: | 390 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_446257.1 | Gene: | Snai1 / 116490 | RGDID: | 620758 | Length: | 264 | Species: | Rattus norvegicus |
Alignment Length: | 283 | Identity: | 109/283 - (38%) |
---|---|---|---|
Similarity: | 141/283 - (49%) | Gaps: | 75/283 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 123 PFQSAFVMAA-----GCNPISAL----WSS-----YQP-HLAAFP---SP-ASSMASPQSVYSYQ 168
Fly 169 QMTPPSSPGSDLETGSEPEDLSVRNDIPLPALFHLFDEAKSSSSGASVSSSSGYSYTPAMSASSA 233
Fly 234 SVAANHAKNYRFKCDECQKMYSTSMGLSKHRQFHCPAAECNQEKKTHSCEECGKLYTTIGALKMH 298
Fly 299 IRTHTLPCKCPICGKAFSRPWLLQGHIRTHTGEKPFQCPDCPRSFADRSNLRAHQQTHVDVKKYA 363
Fly 364 CQVCHKSFSRMSLLNKHSSSNCT 386 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sna | NP_476732.1 | C2H2 Zn finger | 308..328 | CDD:275368 | 16/19 (84%) |
zf-H2C2_2 | 321..344 | CDD:290200 | 16/22 (73%) | ||
zf-C2H2 | 334..356 | CDD:278523 | 15/21 (71%) | ||
C2H2 Zn finger | 336..356 | CDD:275368 | 14/19 (74%) | ||
zf-H2C2_2 | 348..373 | CDD:290200 | 16/24 (67%) | ||
C2H2 Zn finger | 364..380 | CDD:275368 | 10/15 (67%) | ||
C2H2 Zn finger | 247..267 | CDD:275368 | 0/19 (0%) | ||
C2H2 Zn finger | 282..302 | CDD:275368 | 12/19 (63%) | ||
zf-C2H2 | 306..328 | CDD:278523 | 17/21 (81%) | ||
COG5048 | 307..>356 | CDD:227381 | 38/48 (79%) | ||
Snai1 | NP_446257.1 | C2H2 Zn finger | 156..176 | CDD:275368 | 12/19 (63%) |
COG5048 | <177..>253 | CDD:227381 | 58/75 (77%) | ||
zf-C2H2 | 180..202 | CDD:278523 | 17/21 (81%) | ||
C2H2 Zn finger | 182..202 | CDD:275368 | 16/19 (84%) | ||
zf-H2C2_2 | 195..218 | CDD:290200 | 16/22 (73%) | ||
zf-C2H2 | 208..230 | CDD:278523 | 15/21 (71%) | ||
C2H2 Zn finger | 210..230 | CDD:275368 | 14/19 (74%) | ||
C2H2 Zn finger | 238..255 | CDD:275368 | 11/16 (69%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2462 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 219 | 1.000 | Inparanoid score | I3483 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
6 | 5.820 |