DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4161 and armt1

DIOPT Version :9

Sequence 1:NP_001285955.1 Gene:CG4161 / 34907 FlyBaseID:FBgn0028892 Length:484 Species:Drosophila melanogaster
Sequence 2:NP_001014353.1 Gene:armt1 / 541518 ZFINID:ZDB-GENE-050327-51 Length:448 Species:Danio rerio


Alignment Length:452 Identity:159/452 - (35%)
Similarity:245/452 - (54%) Gaps:38/452 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EGPTPRHSLLSGRYKQSFAYLTLRTRMPGIMQQIIMRLLSDLPDLVNKYGEEVRKDVKQIVDAVE 83
            ||..|..| ||.:::.||||||:|.|:|.|:.:::..|..:..:...:||||..:..|:.:..:.
Zfish     4 EGMLPPQS-LSAKFEGSFAYLTVRDRLPTILTKVVDTLHRNKDNFYKEYGEEGTEAEKRAISFLS 67

  Fly    84 RLKMELNRDRQFLLFHGAEPDKVEWNAFITEMPRPKK--------SFFRACWLHAECYLYRRIFS 140
            ||:.||..|:..|.......|...||.:   |.|.:.        |:|::.||:.|||:||||..
Zfish    68 RLRNELQTDKPVLALTDNAEDTQAWNEY---MERQQDLMENGQLVSWFKSPWLYVECYMYRRIQE 129

  Fly   141 FFENSRHLQKYDCFDHLKKEDLMLSEMAMSALARATRGLAKSY---------DAFSKLLRINLWG 196
            ....:..:..:|.|...|.:....|:.|:..|....:.|..:.         :.|.||::::|||
Zfish   130 ALYMNPPMHNFDPFKEGKTQSYFESQQAIKYLCTYLQELITNMENMTEIQLRENFLKLIQVSLWG 194

  Fly   197 NHFEMQIGAFRFTEEDSKDDINVLVKVADIDRILLVDDTTLIWNCLVLA--SKSSG--NRIVDFI 257
            |..::.|.|    .:|:...::.:..:.|:.|.:||||::::|:.||.:  |:|||  :..||.|
Zfish   195 NKCDLSISA----GQDNSQKLSPIDSLPDLQRFILVDDSSMVWSTLVASQGSRSSGMKHARVDII 255

  Fly   258 CDNGGFEFFTDMLLLEYMVDNNLATQVRLHVKAIPWYISDVTRADIEWTLDFLTGHRDECLSALG 322
            .||.|||..||::|.::::.:.||.|:|.|.|:|||::||||:.|.|||:........:.:||.|
Zfish   256 LDNAGFELVTDLVLADFLISSGLAKQIRFHGKSIPWFVSDVTKQDFEWTIKQTMAANHKWMSASG 320

  Fly   323 KKWTHMMNTQKIVIAPTSY----FWTGPQPYFVMVESDIELYRLLTTSKLAIFKGDLNYRKLLGD 383
            .:|.|.|..     ...||    |||.|..:..|......||..|.||.|.:||||||||||.||
Zfish   321 VQWKHFMKE-----GTWSYHDHPFWTLPHEFCDMTVDAANLYSTLQTSDLILFKGDLNYRKLTGD 380

  Fly   384 FIWDSTEEFITCLRGFRPTNICALRTVKCEVVCGLSEGLADSLLKNDHNWMISGNYGVIQYT 445
            ..|:.|..|...||||:|..:|:|||:|.:|..||..|.|:.|...|.:||.:|.|.|:|::
Zfish   381 RKWEHTVRFDQALRGFQPAPLCSLRTLKADVQVGLQAGHAEKLSTQDPDWMTNGKYAVVQFS 442

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG4161NP_001285955.1 DUF89 40..426 CDD:280170 140/410 (34%)
armt1NP_001014353.1 DUF89 24..423 CDD:376673 140/410 (34%)