DRSC/TRiP Functional Genomics Resources

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Protein Alignment wor and SCRT1

DIOPT Version :9

Sequence 1:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_112599.2 Gene:SCRT1 / 83482 HGNCID:15950 Length:348 Species:Homo sapiens


Alignment Length:196 Identity:94/196 - (47%)
Similarity:117/196 - (59%) Gaps:24/196 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   302 SQPGGSGAIVDQTEFCTDQASALIQA---ANVASAQSMQKPVGVPRYHCQDCGKSYSTYSGLSKH 363
            |.|||.|.         .:|.|..:|   ...|.|..        |:.|.:|||:|:|.|.||:|
Human   162 SGPGGRGG---------TRAGAGTEARAGPGAAGAGG--------RHACGECGKTYATSSNLSRH 209

  Fly   364 QQFHCPSAEGNQVKKVFSCKNCDKTYVSLGALKMHIRTHTLPCKCPICGKAFSRPWLLQGHIRTH 428
            :|.| .|.:....::   |..|.|.|||:.|:.||:.||.|..||.:||||||||||||||:|:|
Human   210 KQTH-RSLDSQLARR---CPTCGKVYVSMPAMAMHLLTHDLRHKCGVCGKAFSRPWLLQGHMRSH 270

  Fly   429 TGEKPFSCQHCNRAFADRSNLRAHMQTHSDVKKYSCPTCTKSFSRMSLLAKHLQSGCQTEQSGGP 493
            ||||||.|.||.:||||||||||||||||..|.:.|..|.|||:..|.|.||.:|.|....:|||
Human   271 TGEKPFGCAHCGKAFADRSNLRAHMQTHSAFKHFQCKRCKKSFALKSYLNKHYESACFKGGAGGP 335

  Fly   494 S 494
            :
Human   336 A 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368
C2H2 Zn finger 317..334 CDD:275368 4/19 (21%)
zf-C2H2 345..367 CDD:278523 11/21 (52%)
C2H2 Zn finger 347..367 CDD:275368 11/19 (58%)
PHA00732 379..>417 CDD:177300 19/37 (51%)
C2H2 Zn finger 382..402 CDD:275368 9/19 (47%)
zf-C2H2_8 405..482 CDD:292531 53/76 (70%)
zf-C2H2 406..428 CDD:278523 17/21 (81%)
C2H2 Zn finger 408..428 CDD:275368 16/19 (84%)
zf-H2C2_2 421..444 CDD:290200 16/22 (73%)
zf-C2H2 434..456 CDD:278523 17/21 (81%)
C2H2 Zn finger 436..456 CDD:275368 16/19 (84%)
zf-H2C2_2 448..473 CDD:290200 16/24 (67%)
C2H2 Zn finger 464..481 CDD:275368 8/16 (50%)
SCRT1NP_112599.2 SNAG domain. /evidence=ECO:0000250 1..20
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 129..189 10/35 (29%)
C2H2 Zn finger 224..244 CDD:275368 9/19 (47%)
COG5048 <245..>313 CDD:227381 48/67 (72%)
C2H2 Zn finger 250..270 CDD:275368 16/19 (84%)
C2H2 Zn finger 278..298 CDD:275368 16/19 (84%)
C2H2 Zn finger 306..322 CDD:275368 7/15 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2462
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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