DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wor and ZIPIC

DIOPT Version :9

Sequence 1:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_651765.1 Gene:ZIPIC / 43566 FlyBaseID:FBgn0039740 Length:457 Species:Drosophila melanogaster


Alignment Length:459 Identity:102/459 - (22%)
Similarity:172/459 - (37%) Gaps:117/459 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 EQLARRIWEETREIARAFPDVFTREEI---------AKSLARLGYGEFELPPEEEVMEPEPEPEQ 132
            |:|||  :.::.:|||..     |.||         :|...:..|.|.:|..|..:.:.:...|:
  Fly    56 EKLAR--YHKSIQIARKL-----RGEILELIHSPYMSKDHKQTSYKEDDLDRETTISKFDGNIEE 113

  Fly   133 HLPLRYTRDASPTIIKAEPSDEEQFPLRNYNN--------NLLKSIAEYEDCMKMQNIKEEIPPI 189
                            |:..|||:..|.:...        .:::.:||.|....::..:||    
  Fly   114 ----------------AQQQDEEEQELESVGTTVTLVGPAGIVEEVAEEEHTFIIKQSEEE---- 158

  Fly   190 PSPQLFYPPPTPLAEPEDLSVTQRRVLSENMNLQNVARALLSMQHMAPQHAPPPIDMEEDQENQD 254
               ..|:.....|....::.:.:    .|...::.||..:..:.|...:....|.|.:|.|| :|
  Fly   159 ---DEFHSVDLELDIDNEIIINE----EEAHEVEEVAHEIEEVAHEIEEEDLLPHDKQEAQE-ED 215

  Fly   255 INQLKIKSSNDLYYQCQQCNKCYATYAGLVKH-------QQTHAYESTEYKIIRSQPGGSGAIVD 312
            ..:....|..|.:..            |.:::       |:.....|.||.:....|.       
  Fly   216 FFKEDTMSDFDEHLD------------GAIEYIISDGEDQEQDNESSGEYTVNIQCPS------- 261

  Fly   313 QTEFCTDQASALIQAANVASAQSMQKPVGVPRYHCQDCGKSYSTYSGLSKH-------QQFHCPS 370
                |.::.|:. :|.||.:     |....|.|.|..|||:..:|||...|       :||.||.
  Fly   262 ----CPEKFSSR-RAYNVHT-----KREHFPGYVCDQCGKTLQSYSGFIGHLQNHEPVKQFACPV 316

  Fly   371 AEGNQVKKV--------------FSCKNCDKTYVSLGALKMHIRTH---TLPCKCPICGKAFSRP 418
            ......:|.              :.|..|.|.:|...||..|...|   |...:|.:||......
  Fly   317 CPERFSRKFRLKHHMAWHSGETPYQCDVCSKRFVHKVALYKHKMIHDSETKRLECQVCGFKTRTK 381

  Fly   419 WLLQGHIRTHTGEKPFSCQHCNRAFADRSNLRAHMQTHSDV-----KKYSCPTCTKSFSRMSLLA 478
            ..|:.|:|:|||:|||:|..||:.|:...|::||::.|...     :::.|..||.:|.......
  Fly   382 AHLERHMRSHTGDKPFACPVCNKRFSQMYNMKAHLREHESPGTNRHRRFHCSKCTHTFINEQNYD 446

  Fly   479 KHLQ 482
            .|:|
  Fly   447 AHVQ 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 2/26 (8%)
C2H2 Zn finger 317..334 CDD:275368 5/16 (31%)
zf-C2H2 345..367 CDD:278523 10/28 (36%)
C2H2 Zn finger 347..367 CDD:275368 9/26 (35%)
PHA00732 379..>417 CDD:177300 12/54 (22%)
C2H2 Zn finger 382..402 CDD:275368 7/19 (37%)
zf-C2H2_8 405..482 CDD:292531 25/81 (31%)
zf-C2H2 406..428 CDD:278523 6/21 (29%)
C2H2 Zn finger 408..428 CDD:275368 6/19 (32%)
zf-H2C2_2 421..444 CDD:290200 12/22 (55%)
zf-C2H2 434..456 CDD:278523 8/21 (38%)
C2H2 Zn finger 436..456 CDD:275368 7/19 (37%)
zf-H2C2_2 448..473 CDD:290200 8/29 (28%)
C2H2 Zn finger 464..481 CDD:275368 4/16 (25%)
ZIPICNP_651765.1 C2H2 Zn finger 286..306 CDD:275368 8/19 (42%)
C2H2 Zn finger 314..334 CDD:275368 3/19 (16%)
zf-H2C2_2 327..351 CDD:290200 3/23 (13%)
C2H2 Zn finger 342..391 CDD:275368 15/48 (31%)
zf-H2C2_2 383..408 CDD:290200 13/24 (54%)
C2H2 Zn finger 399..419 CDD:275368 7/19 (37%)
C2H2 Zn finger 432..449 CDD:275368 4/16 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457212
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.