DRSC/TRiP Functional Genomics Resources

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Protein Alignment wor and CG3281

DIOPT Version :9

Sequence 1:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster


Alignment Length:430 Identity:96/430 - (22%)
Similarity:164/430 - (38%) Gaps:124/430 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 EEQFPLRNYNNNLLKSIAEYEDCMKMQNIKEEIPPIPSPQLFYPPPTPLAEPEDLSVTQRRVLSE 218
            :...|:....|...:.|..||..::::|..|.:      |..:......|:|:::.|....::.:
  Fly    57 DPNLPMHLCQNCARRLIGAYEFIVEVENAHETL------QNLFEQQEVAAKPDEVHVDVVELIDQ 115

  Fly   219 NMNLQNVARALLSM-QHMAPQHAPPPIDMEE-------------------------DQENQDINQ 257
            :        .::|| |:::...|...::|||                         |.|.:|..|
  Fly   116 D--------DVVSMAQYLSTSFAEQHVEMEEKYGDQDCSAFTSDVGEEPLYASEDRDDEPEDSFQ 172

  Fly   258 LK--------------------IKSSNDLYYQCQQCNKCYATYAGLVKH-QQTHAYESTEYKIIR 301
            ||                    :..|.:..|:|..|.:.:|....|.:| .|.|..         
  Fly   173 LKPRPDEIENRELSRPSQLGSRLNHSANFIYKCAVCPRVFAKSESLTRHFSQAHKL--------- 228

  Fly   302 SQPGGSGAIVDQTEFCTDQASALIQAANVASAQSMQKPVGVPRYHCQDCGKSYSTYSGLSKHQQF 366
                                     .|:||:.:...:..|.....|:.|.:::.....|.:|.|.
  Fly   229 -------------------------TADVAAMKLANESCGTGLLTCEHCPRTFKRQDTLRRHMQA 268

  Fly   367 HCPSA--------EGNQVKKVFS----CKNCDKTYVSLGALKMHIRTHT--LPCKCPICGKAFSR 417
            ..|.|        ..|..:|..:    |.:|..:: .:.:|.:|||.||  .|.||..|.|||.|
  Fly   269 FHPDAIALEPEETTDNSARKRIAKRRDCPHCGLSF-PVSSLTIHIRRHTGDNPYKCDQCEKAFPR 332

  Fly   418 PWLLQGHIRTHTGEKPFSCQHCNRAFADRSNLRAHMQTHSDVKKYSCPTCTKSFSRMSLLAKHLQ 482
            ...|..|:|.||||:|..|:.|::.|..::.|..||:.|:..:.|||..|:|||.:.:.|..|::
  Fly   333 SQDLSLHMRQHTGERPSECKICSKKFISQNKLARHMRLHTGQRPYSCKMCSKSFVQSNDLKIHMR 397

  Fly   483 --SGCQTEQSG--GPSGSGGGFDQQQLQQHLQVY--EEGH 516
              :|.:..|.|  |.|...|        .||.::  .:||
  Fly   398 RHTGERPYQCGVCGESFVCG--------SHLNIHRNRKGH 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 6/20 (30%)
C2H2 Zn finger 317..334 CDD:275368 3/16 (19%)
zf-C2H2 345..367 CDD:278523 5/21 (24%)
C2H2 Zn finger 347..367 CDD:275368 5/19 (26%)
PHA00732 379..>417 CDD:177300 15/43 (35%)
C2H2 Zn finger 382..402 CDD:275368 6/19 (32%)
zf-C2H2_8 405..482 CDD:292531 32/76 (42%)
zf-C2H2 406..428 CDD:278523 10/21 (48%)
C2H2 Zn finger 408..428 CDD:275368 9/19 (47%)
zf-H2C2_2 421..444 CDD:290200 10/22 (45%)
zf-C2H2 434..456 CDD:278523 6/21 (29%)
C2H2 Zn finger 436..456 CDD:275368 6/19 (32%)
zf-H2C2_2 448..473 CDD:290200 11/24 (46%)
C2H2 Zn finger 464..481 CDD:275368 6/16 (38%)
CG3281NP_650132.1 zf-AD 14..92 CDD:285071 8/40 (20%)
C2H2 Zn finger 205..226 CDD:275368 6/20 (30%)
C2H2 Zn finger 249..266 CDD:275368 3/16 (19%)
COG5048 <294..>391 CDD:227381 38/97 (39%)
C2H2 Zn finger 296..315 CDD:275368 6/19 (32%)
zf-H2C2_2 307..330 CDD:290200 11/22 (50%)
C2H2 Zn finger 323..343 CDD:275368 9/19 (47%)
zf-H2C2_2 335..358 CDD:290200 10/22 (45%)
C2H2 Zn finger 351..371 CDD:275368 6/19 (32%)
zf-H2C2_2 364..388 CDD:290200 11/23 (48%)
C2H2 Zn finger 379..399 CDD:275368 7/19 (37%)
zf-H2C2_2 391..416 CDD:290200 7/24 (29%)
C2H2 Zn finger 407..424 CDD:275368 6/24 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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