DRSC/TRiP Functional Genomics Resources

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Protein Alignment wor and snai2

DIOPT Version :9

Sequence 1:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_989424.1 Gene:snai2 / 395065 XenbaseID:XB-GENE-487371 Length:266 Species:Xenopus tropicalis


Alignment Length:341 Identity:137/341 - (40%)
Similarity:168/341 - (49%) Gaps:112/341 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 NY----NNNLLKSIAEYEDCMKMQNIKEEIPPIPSPQLF----YPPPT--------PLAEPEDLS 209
            ||    |:.::.|...||        :..:..:|.|:|:    |.|.|        ||  |.|||
 Frog    18 NYGELDNHTVIISPFLYE--------RYPVSVLPQPELYSSVAYSPITVWTGLLHPPL--PSDLS 72

  Fly   210 VTQRRVLSENMNLQNVARALLSMQHMAPQHAPPPIDMEEDQENQDINQLKIKSSNDLYYQCQQCN 274
                              .|........:.:|||   :.|..::|                    
 Frog    73 ------------------PLSGYPSSLGRVSPPP---QSDTSSKD-------------------- 96

  Fly   275 KCYATYAGLVKHQQTHAYESTEYKIIRSQPGGSGAIVDQTEFCTDQASALIQAANVASAQSMQKP 339
                           |:             |....|.|:.|             .:.:..|....
 Frog    97 ---------------HS-------------GSESPISDEEE-------------RLQTKLSDSHA 120

  Fly   340 VGVPRYHCQDCGKSYSTYSGLSKHQQFHCPSAEGNQVKKVFSCKNCDKTYVSLGALKMHIRTHTL 404
            :...::.|..|.|:|||:|||:||:|.||.:    |.:|.||||.|:|.||||||||||||||||
 Frog   121 IEAEKFQCSLCSKTYSTFSGLAKHKQLHCDA----QSRKSFSCKYCEKEYVSLGALKMHIRTHTL 181

  Fly   405 PCKCPICGKAFSRPWLLQGHIRTHTGEKPFSCQHCNRAFADRSNLRAHMQTHSDVKKYSCPTCTK 469
            ||.|.|||||||||||||||||||||||||||.|||||||||||||||:|||||||||.|..|:|
 Frog   182 PCVCKICGKAFSRPWLLQGHIRTHTGEKPFSCPHCNRAFADRSNLRAHLQTHSDVKKYQCKNCSK 246

  Fly   470 SFSRMSLLAKHLQSGC 485
            :|||||||.||.:|||
 Frog   247 TFSRMSLLHKHEESGC 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 0/19 (0%)
C2H2 Zn finger 317..334 CDD:275368 0/16 (0%)
zf-C2H2 345..367 CDD:278523 12/21 (57%)
C2H2 Zn finger 347..367 CDD:275368 12/19 (63%)
PHA00732 379..>417 CDD:177300 31/37 (84%)
C2H2 Zn finger 382..402 CDD:275368 16/19 (84%)
zf-C2H2_8 405..482 CDD:292531 66/76 (87%)
zf-C2H2 406..428 CDD:278523 19/21 (90%)
C2H2 Zn finger 408..428 CDD:275368 18/19 (95%)
zf-H2C2_2 421..444 CDD:290200 21/22 (95%)
zf-C2H2 434..456 CDD:278523 19/21 (90%)
C2H2 Zn finger 436..456 CDD:275368 17/19 (89%)
zf-H2C2_2 448..473 CDD:290200 18/24 (75%)
C2H2 Zn finger 464..481 CDD:275368 11/16 (69%)
snai2NP_989424.1 DUF4764 82..>160 CDD:292583 29/145 (20%)
C2H2 Zn finger 128..148 CDD:275370 12/19 (63%)
C2H2 Zn finger 159..179 CDD:275368 16/19 (84%)
C2H2 Zn finger 185..205 CDD:275368 18/19 (95%)
zf-H2C2_2 198..221 CDD:290200 21/22 (95%)
zf-C2H2 211..233 CDD:278523 19/21 (90%)
C2H2 Zn finger 213..233 CDD:275368 17/19 (89%)
zf-H2C2_2 225..250 CDD:290200 18/24 (75%)
C2H2 Zn finger 241..257 CDD:275368 10/15 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 52 1.000 Domainoid score I11288
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 255 1.000 Inparanoid score I3084
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9353
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3546
SonicParanoid 1 1.000 - - X955
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.990

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