DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wor and CG3065

DIOPT Version :9

Sequence 1:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_611861.1 Gene:CG3065 / 37818 FlyBaseID:FBgn0034946 Length:400 Species:Drosophila melanogaster


Alignment Length:240 Identity:68/240 - (28%)
Similarity:99/240 - (41%) Gaps:37/240 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   304 PGGSGAIVDQTEFCTDQASALIQAANV---------ASAQSMQKPVGVPRYHCQDCGKSYSTYSG 359
            |..|||.:.      :|||.:|..|:.         |:.::      ||.:..:...:..|.|.|
  Fly    30 PTMSGANIH------EQASDMILRASTIFEDVKHDEANVEN------VPHHGVETEPEDDSHYGG 82

  Fly   360 LSKHQQFHCPSAE------GNQVKKVFSC--KNCDKTYVSLGALKMHIRTHT----LPCKCPICG 412
            ....:....||.:      .:..|:.|.|  .||.|:|.....|:.|:..||    ..|..|.||
  Fly    83 NGNSKIRIMPSVKLMATTLASDPKRKFVCPYDNCTKSYGKSSHLRSHLTWHTGIKPFVCSEPKCG 147

  Fly   413 KAFSRPWLLQGHIRTHTGEKPFSCQHCNRAFADRSNLRAHMQTHSDVKKYSCPTCTKSFSRMSLL 477
            |.|:|...|..|:|||||||||.|..|.:.|:...:|..|:.||....|.|.|..|...|...:.
  Fly   148 KGFTRSDELNRHLRTHTGEKPFECIQCTKKFSRSDHLTKHLATHDRQLKGSTPKRTVPSSSGGVR 212

  Fly   478 AKHLQSGCQTEQSGGPSGSGG--GFDQQQLQQHLQVYEEGHNPHQ 520
            .|..:....:|...|......  |..:..::.|.|  ::.||.||
  Fly   213 LKPPKKQIHSESDSGFHFMAAMVGCGEPSMKHHHQ--QQQHNQHQ 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368
C2H2 Zn finger 317..334 CDD:275368 6/25 (24%)
zf-C2H2 345..367 CDD:278523 3/21 (14%)
C2H2 Zn finger 347..367 CDD:275368 3/19 (16%)
PHA00732 379..>417 CDD:177300 16/43 (37%)
C2H2 Zn finger 382..402 CDD:275368 7/21 (33%)
zf-C2H2_8 405..482 CDD:292531 31/76 (41%)
zf-C2H2 406..428 CDD:278523 10/21 (48%)
C2H2 Zn finger 408..428 CDD:275368 9/19 (47%)
zf-H2C2_2 421..444 CDD:290200 13/22 (59%)
zf-C2H2 434..456 CDD:278523 6/21 (29%)
C2H2 Zn finger 436..456 CDD:275368 5/19 (26%)
zf-H2C2_2 448..473 CDD:290200 8/24 (33%)
C2H2 Zn finger 464..481 CDD:275368 4/16 (25%)
CG3065NP_611861.1 COG5048 99..>400 CDD:227381 51/159 (32%)
C2H2 Zn finger 111..133 CDD:275368 7/21 (33%)
zf-C2H2 139..163 CDD:278523 10/23 (43%)
C2H2 Zn finger 141..163 CDD:275368 10/21 (48%)
zf-H2C2_2 155..180 CDD:290200 14/24 (58%)
C2H2 Zn finger 171..191 CDD:275368 5/19 (26%)
zf-C2H2 346..368 CDD:278523
C2H2 Zn finger 348..368 CDD:275368
zf-H2C2_2 360..385 CDD:290200
C2H2 Zn finger 376..396 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2499
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.950

Return to query results.
Submit another query.