DRSC/TRiP Functional Genomics Resources

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Protein Alignment wor and CG1603

DIOPT Version :9

Sequence 1:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_001260778.1 Gene:CG1603 / 35683 FlyBaseID:FBgn0033185 Length:586 Species:Drosophila melanogaster


Alignment Length:494 Identity:92/494 - (18%)
Similarity:166/494 - (33%) Gaps:155/494 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 GYGEFELPPEEEVMEPEPEPEQHLPL-----------------------------RYTRD----- 141
            |....|||..:||.:.:...:.|:||                             |.||.     
  Fly   123 GGSSLELPAGKEVTQMDESSQNHIPLNTDDDDVDCSDFFMSEDDLAPPRKPGRPPRRTRPGQVFK 187

  Fly   142 -------ASPTIIKA-----------EPSDEEQFPLRNYNNNLLKSIAEYEDCMKMQNIKEEIPP 188
                   ::|.::..           .||||      :|.:...:|:| ||..|:..:.|..:  
  Fly   188 FKVSFIRSNPRVLHLIQAYKEHPCLWNPSDE------HYQDEPARSMA-YEAIMERMDRKANV-- 243

  Fly   189 IPSPQLFYPPPTPLAEPEDLSVTQRRV-LSENMNLQNVARAL---LSMQHMAP---QHAPPPIDM 246
                         |...|:|..|..:: :...:.|:...|..   |:.::.|.   ....|.:..
  Fly   244 -------------LFTVEELKKTLEQLHVQYTLALETKQRGKLVGLAARYFAKCEFLSVAPVVTP 295

  Fly   247 EEDQENQDINQLKIKSSND----------------LYYQ-----------CQQCNKCYATYAGLV 284
            .|::|:.|:..:|:....:                ||.|           .....:....:..:|
  Fly   296 RENEEDNDLTAIKLNFKEENLITTSFIETYANYPVLYNQALPDFGSIEIRADAFKRMAKEFQPVV 360

  Fly   285 KHQQTHAYESTE------YKIIRSQPGGSGAIVDQTEFCTDQASALIQAANVASAQSMQK----- 338
            |..:|..|.:..      |..||...  |..::.:   |:.|....:|..:...|:..:.     
  Fly   361 KANETDVYIAVNKLRRWLYDAIRRLK--SKELIQK---CSKQEVQYLQMCSFLPAKGSESQVLYC 420

  Fly   339 ---------------------PVGVPRYHCQDCGKSYSTYSGLSKHQQFHCPSAEGNQVKKVFSC 382
                                 .||...|.|..|.:.:..:..:.:|:.       .:..::...|
  Fly   421 DYCDKRFHGDYNLRVHIVKAHEVGDLPYLCSFCPRRFDRHVDMDRHKL-------RSHFERKLKC 478

  Fly   383 KNCDKTYVSLGALKMHIRTHT--LPCKCPICGKAFSRPWLLQGHIR-THTGEKPFSCQHCNRAFA 444
            :.|:|::.....||:|...||  .|..|.||||.|....||..|:. .|...:|:||..|.:.|.
  Fly   479 QYCEKSFAVDTDLKVHTLIHTGERPHVCDICGKTFRLKLLLDHHVNGVHLNIRPYSCNMCTKTFR 543

  Fly   445 DRSNLRAHMQTHSDVKKYSCPTCTKSFSRMSLLAKHLQS 483
            .:..|..|::.|.:::...|..|..:|...|.|::|.:|
  Fly   544 KKFELANHIKGHLNIRDKKCEYCDATFYDHSSLSRHRRS 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 2/19 (11%)
C2H2 Zn finger 317..334 CDD:275368 3/16 (19%)
zf-C2H2 345..367 CDD:278523 4/21 (19%)
C2H2 Zn finger 347..367 CDD:275368 3/19 (16%)
PHA00732 379..>417 CDD:177300 15/39 (38%)
C2H2 Zn finger 382..402 CDD:275368 6/19 (32%)
zf-C2H2_8 405..482 CDD:292531 25/77 (32%)
zf-C2H2 406..428 CDD:278523 9/22 (41%)
C2H2 Zn finger 408..428 CDD:275368 9/20 (45%)
zf-H2C2_2 421..444 CDD:290200 7/23 (30%)
zf-C2H2 434..456 CDD:278523 6/21 (29%)
C2H2 Zn finger 436..456 CDD:275368 5/19 (26%)
zf-H2C2_2 448..473 CDD:290200 6/24 (25%)
C2H2 Zn finger 464..481 CDD:275368 5/16 (31%)
CG1603NP_001260778.1 MADF_DNA_bdg 202..287 CDD:287510 19/106 (18%)
GT1 321..408 CDD:304916 14/91 (15%)
C2H2 Zn finger 420..441 CDD:275368 0/20 (0%)
COG5048 <424..583 CDD:227381 40/166 (24%)
C2H2 Zn finger 450..471 CDD:275368 3/27 (11%)
C2H2 Zn finger 478..498 CDD:275368 6/19 (32%)
zf-H2C2_2 490..513 CDD:290200 11/22 (50%)
C2H2 Zn finger 506..527 CDD:275368 9/20 (45%)
C2H2 Zn finger 535..555 CDD:275368 5/19 (26%)
C2H2 Zn finger 563..583 CDD:275368 7/20 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457171
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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