DRSC/TRiP Functional Genomics Resources

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Protein Alignment wor and az2

DIOPT Version :10

Sequence 1:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_610289.2 Gene:az2 / 35682 FlyBaseID:FBgn0025185 Length:593 Species:Drosophila melanogaster


Alignment Length:579 Identity:109/579 - (18%)
Similarity:183/579 - (31%) Gaps:211/579 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 RRRFD------AAMNQTKEQLARRIWEE----TREIARAFPDV---FTREEIAKSLARLGYGEFE 116
            |..|:      |..|....::..:.|.|    .:|...|.|.:   .|..|:..| |:.   |.|
  Fly    10 RNNFEHFVLACAHQNDCYVEMEFKRWREFIVHVKEHLEANPSMQQELTTSEVISS-AKC---EEE 70

  Fly   117 LPPEEEVMEPEPEPEQHL--------PLRYTRDASPTIIKAEPSDEEQFPLRNYNNNLLKSIAEY 173
            :.|.:..:..|| ||..|        |.....|.|.:.::.|..::::          :.|.:..
  Fly    71 VSPAKVFIVEEP-PENCLAEDMFVDVPPSSENDESTSPVEEEEEEDDE----------VDSSSMT 124

  Fly   174 EDCMKMQNIKEEIPPIP---------SPQL-----FYPPPTPLAEPEDLSVTQRRVLSENMNLQN 224
            .||...........|:.         ||::     .|...|.|.:|.|.|...:.      ...|
  Fly   125 VDCELGTRNSTHFAPLTKFNPTFYRRSPRITQFIELYKQQTCLWDPADESYRDKE------KRAN 183

  Fly   225 VARALLSMQHMAPQHAPPPIDMEEDQENQDINQLKIKSSNDLYYQCQQCNKC----YATYAGLVK 285
            ....||.                           ::|::.:|:....:..||    :|.||.:.:
  Fly   184 AYEELLE---------------------------QLKATVNLHLTAYKLKKCITSLHAQYASISR 221

  Fly   286 HQQTH------AYESTEYKIIRSQPG----------GSGAI--------------VD-------- 312
            .::|.      .|...:|..:..:..          |.|.|              :|        
  Fly   222 QKKTQKLTKVPLYYHGKYSFLAERGSLEDADSDDVDGDGKIKLVFTEENQLTTQFIDLYSKFPQL 286

  Fly   313 ----QTEFC--TDQASALIQAANVA----------------SAQSMQ-------------KPVGV 342
                ...||  ..:.|:||:..::.                |.|||:             :.||:
  Fly   287 YDPAHKHFCNLNVRKSSLIEITDLLTSEFSLGLVTHYDVYDSIQSMRQWYSRRIKTLTDVQCVGL 351

  Fly   343 ---------------------PRYHCQDCGKSYSTYSGLSKHQ----------QFHCPSAEGN-- 374
                                 .:..|:.|..|:||...|..||          .|.|...|.|  
  Fly   352 SLAEKQYIERCNSFMPTKSFRQKLKCEVCEHSFSTDHALQAHQFRDHKMGDGGWFRCTLCELNFD 416

  Fly   375 ------------QVKKVFSCKNCDKTYVSLGALKMHIRTH-----TLPCKCPICGKAFSRPWLLQ 422
                        .:.|.|.|:.|.:::.....|.:|.|||     ..|..|..|||.|.:...:.
  Fly   417 RKCHLQQHSQRVHMDKSFVCEICSRSFAFGNQLAIHKRTHDEKHVAKPFVCEFCGKCFKQKIQMT 481

  Fly   423 GHI-RTHTGEKPFSCQHCNRAFADRSNLRAHMQTHSDVKKYSCPTCTKSFSRMSLLAKH 480
            .|: ..||..:.|.|..|.:.|..:.:|:.|::.|.:::...|..|.|:|:..:.|.||
  Fly   482 THVTAVHTKIRAFKCDMCPKDFLTKRDLKDHVKAHLNIRDKVCEVCQKAFTNANALVKH 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 5/23 (22%)
C2H2 Zn finger 317..334 CDD:275368 5/34 (15%)
zf-C2H2 345..367 CDD:395048 8/31 (26%)
C2H2 Zn finger 347..367 CDD:275368 8/29 (28%)
zf-C2H2 380..402 CDD:395048 6/21 (29%)
C2H2 Zn finger 382..402 CDD:275368 5/19 (26%)
zf-C2H2 406..428 CDD:395048 6/22 (27%)
C2H2 Zn finger 408..428 CDD:275368 6/20 (30%)
zf-C2H2 434..456 CDD:395048 6/21 (29%)
C2H2 Zn finger 436..456 CDD:275368 5/19 (26%)
C2H2 Zn finger 464..481 CDD:275368 7/17 (41%)
az2NP_610289.2 MADF_DNA_bdg 157..242 CDD:463144 19/117 (16%)
MADF_DNA_bdg 276..>341 CDD:463144 10/64 (16%)
C2H2 Zn finger 377..398 CDD:275368 8/20 (40%)
C2H2 Zn finger 408..429 CDD:275368 3/20 (15%)
C2H2 Zn finger 436..456 CDD:275368 5/19 (26%)
C2H2 Zn finger 467..488 CDD:275368 6/20 (30%)
C2H2 Zn finger 496..516 CDD:275368 5/19 (26%)
C2H2 Zn finger 524..544 CDD:275368 7/17 (41%)
C2H2 Zn finger 551..572 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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