DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wor and zf30C

DIOPT Version :9

Sequence 1:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster


Alignment Length:647 Identity:130/647 - (20%)
Similarity:211/647 - (32%) Gaps:214/647 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 PEPQPVPTELR---RRFDAAMNQTKEQLARRIWEETREIARAFPDVFTREEIAKSLARLGYGEFE 116
            |..:..|.|.:   .||.:|.|.:|.:.:|             ||.            .|..|::
  Fly   125 PREESRPMECKCCYTRFSSASNLSKHRRSR-------------PDT------------CGQPEYD 164

  Fly   117 LP----------------------PEEEVMEPEPEPEQHLPL----------------------- 136
            .|                      .|:...|...:.:..:||                       
  Fly   165 SPGSSDGMKKHKAFRKKDRNRDSDDEDTTSEESEDSDDDIPLASRLKTKLKQESQNSDSGDECPD 229

  Fly   137 ------RYTRDAS------PTIIKAEPSDEEQFP--------------------------LRNYN 163
                  ....|||      |.::|.|..|||.|.                          |.|..
  Fly   230 FEPNNSEDDADASGFQLPPPAMVKVEAFDEEDFEYQDASMYVKTESTDIFSNEKDKLLDVLLNEG 294

  Fly   164 NNL----------------------LKSIAEYEDCMKMQNIKEEIPPIP-----SPQLFYP---- 197
            :.|                      |..:|| ||.::::..:.|.||.|     .|:...|    
  Fly   295 DGLKPFESLKVEQGAGILDEIAAVPLVEVAE-EDVLELRGHQMEKPPGPRKRGRPPKEKIPVVKR 358

  Fly   198 -------PPTPLAEPEDLSVTQRRV-------LSENMNLQNVARALLSMQHMAP-QHAPPPID-- 245
                   |.:|  .|:|.|.|.:||       |.|.:.:.|.........|... .|...|.:  
  Fly   359 KYRKRNAPRSP--SPDDSSGTPKRVAKISKKELKERLKMINKMEKSWKCPHCVKIYHIRKPYEKH 421

  Fly   246 MEEDQENQDINQLKIKSSNDLY-------YQCQQCNKCYATYAGLVKHQQTHAYESTEYKIIRSQ 303
            :.:|.:..:....:|....|::       ::|..|:|.|.....||.|.:.|             
  Fly   422 LRDDHKLNEAEMKEIFKDVDVHAKLDEEVFKCPICSKIYLVEKRLVTHMKVH------------- 473

  Fly   304 PGGSGAIVDQTE-FCTDQASALIQAANVASAQSMQKPVGVPRYHCQDCGKSYSTYSGLSKHQQ-F 366
             |..|.:..:.. :|....:...||...|.||..:      ..:|:.|.|..:.:..|..|:: |
  Fly   474 -GEDGKLTFKCPCYCNLFFATKEQATEHARAQHKE------LLYCEKCDKYMTGHDSLKNHERNF 531

  Fly   367 HCPSAEGNQVKKVFSCKNCDKTYVSLGALKMHIRTH--TLPC-KCPICGKAFSRPWLLQGHIRTH 428
            |......:|.:.:. |..|.|.:....:|..|:|:.  .||. .|.:|||..|...:|:.|:..|
  Fly   532 HSKKEPRSQQRNLI-CDKCGKKFTGRTSLSDHVRSDCGRLPLYGCSVCGKHLSTAGILKTHMLLH 595

  Fly   429 TGEKPFSCQHCNRAFADRSNLRAHMQT-HSDVKKYSCPTCTKSFSRMSLLAKHLQSGCQTEQSGG 492
            ..:.|:.|..|.:.|..::..::|::| |:|.|.|.|..|.|.:.....|..|:     |..:|.
  Fly   596 KADTPYQCDKCGKTFKVKAQYKSHLKTRHTDYKPYKCHLCPKEYPYRESLLTHM-----TVHTGI 655

  Fly   493 P----SGSGGGFD-QQQLQQHLQVYEE--GHNPHQLYYAGSVGSSNG------EEEEGGEYQ 541
            .    :..|..|. ...||.|.:|:.:  |..|........:|...|      :.|.|.||:
  Fly   656 KRFLCNNCGKRFTCISNLQAHRKVHADTCGQLPLNAKATQYMGVQRGKLLMGAKPEAGMEYE 717

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 7/19 (37%)
C2H2 Zn finger 317..334 CDD:275368 4/16 (25%)
zf-C2H2 345..367 CDD:278523 5/22 (23%)
C2H2 Zn finger 347..367 CDD:275368 5/20 (25%)
PHA00732 379..>417 CDD:177300 12/40 (30%)
C2H2 Zn finger 382..402 CDD:275368 6/19 (32%)
zf-C2H2_8 405..482 CDD:292531 24/78 (31%)
zf-C2H2 406..428 CDD:278523 7/22 (32%)
C2H2 Zn finger 408..428 CDD:275368 7/19 (37%)
zf-H2C2_2 421..444 CDD:290200 6/22 (27%)
zf-C2H2 434..456 CDD:278523 5/22 (23%)
C2H2 Zn finger 436..456 CDD:275368 5/20 (25%)
zf-H2C2_2 448..473 CDD:290200 9/25 (36%)
C2H2 Zn finger 464..481 CDD:275368 4/16 (25%)
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368
C2H2 Zn finger 61..82 CDD:275368
C2H2 Zn finger 98..117 CDD:275368
C2H2 Zn finger 134..152 CDD:275368 5/17 (29%)
C2H2 Zn finger 511..532 CDD:275370 5/20 (25%)
COG5048 <523..>672 CDD:227381 40/154 (26%)
C2H2 Zn finger 546..566 CDD:275368 6/19 (32%)
C2H2 Zn finger 575..595 CDD:275368 7/19 (37%)
C2H2 Zn finger 603..624 CDD:275368 5/20 (25%)
C2H2 Zn finger 632..652 CDD:275368 6/24 (25%)
C2H2 Zn finger 660..680 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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