DRSC/TRiP Functional Genomics Resources

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Protein Alignment wor and CG1529

DIOPT Version :10

Sequence 1:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_001138223.2 Gene:CG1529 / 33077 FlyBaseID:FBgn0031144 Length:512 Species:Drosophila melanogaster


Alignment Length:368 Identity:89/368 - (24%)
Similarity:146/368 - (39%) Gaps:88/368 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 LQNVAR----ALLSMQHMAPQHAPPPIDMEED-----------QENQDINQLKIKSSNDLYYQCQ 271
            |:.|||    .|:..|         |:|:..|           :||.:.|:.:::..::.....|
  Fly    68 LRQVARESSQKLIGWQ---------PVDIAVDRVKEEPPDEGLKENHEENEHELEEEHEKQADGQ 123

  Fly   272 QCNKCYATYAGLVKHQQTH--------------AYESTEYKIIRSQPGGS----GAIVDQTEFCT 318
            |.:        |.|.|:..              .||:::.::  ||..||    |...||   |.
  Fly   124 QVD--------LSKKQEDQKKILDDREDEEYPDEYENSQQQL--SQGTGSKRRAGLACDQ---CG 175

  Fly   319 DQASAL-IQAANVASA-QSMQKPVGVPRYHCQDCGKSYSTYSGLSKHQQFHCPSAEG-NQVKKVF 380
            .|...| ...|::.|. |...||     :.|:.|.||::.|..|..|.:...|..|. .|..:..
  Fly   176 KQVYKLPYLEAHIRSVHQGYSKP-----FLCRSCDKSFTRYEQLRSHMRNAHPQLEQLQQELRDL 235

  Fly   381 SCKNCDKTYVSLGALKMHIRTHTLPCK--CPICGKA-FSRPWLLQGHIRTH--TGEKPFSCQHCN 440
            .|:.|::.|.:..||..|::.|....:  |..||.| .:|..||. |:|||  |.|: |.|:.|.
  Fly   236 ICELCNRQYSTKNALGEHLKRHAQRKEHVCEHCGVAKVTRTELLT-HLRTHNPTWER-FKCEQCP 298

  Fly   441 RAFADRSNLRAHMQ-THSDVKKYSCPTCTKSFSRMSLLAKHLQSGCQTEQSG-GPSGSGGGF--- 500
            :.|..:|.:..|:: .|...:::.|..|.|.|...:...:|  ....||.:| |.:.....|   
  Fly   299 QLFRHKSAISRHVRVVHEGQRRFQCGHCEKKFGTHASQVRH--ERLHTESTGSGEAAEEWPFACI 361

  Fly   501 -------DQQQLQQHLQVYEEGHNPHQLYYAGSVGSSNGEEEE 536
                   .:|.|:.||:    .|...:.:......|...:|:|
  Fly   362 HCQKPCVSRQTLELHLR----RHRARKTHRKRREHSRESQEQE 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 5/19 (26%)
C2H2 Zn finger 317..334 CDD:275368 5/18 (28%)
zf-C2H2 345..367 CDD:395048 7/21 (33%)
C2H2 Zn finger 347..367 CDD:275368 7/19 (37%)
zf-C2H2 380..402 CDD:395048 6/21 (29%)
C2H2 Zn finger 382..402 CDD:275368 6/19 (32%)
zf-C2H2 406..428 CDD:395048 9/24 (38%)
C2H2 Zn finger 408..428 CDD:275368 9/20 (45%)
zf-C2H2 434..456 CDD:395048 6/22 (27%)
C2H2 Zn finger 436..456 CDD:275368 5/20 (25%)
C2H2 Zn finger 464..481 CDD:275368 4/16 (25%)
CG1529NP_001138223.2 zf-AD 11..79 CDD:462262 4/10 (40%)
C2H2 Zn finger 171..192 CDD:275368 7/23 (30%)
C2H2 Zn finger 201..222 CDD:275368 7/20 (35%)
C2H2 Zn finger 237..257 CDD:275368 6/19 (32%)
C2H2 Zn finger 265..285 CDD:275368 9/20 (45%)
C2H2 Zn finger 294..315 CDD:275368 5/20 (25%)
C2H2 Zn finger 323..343 CDD:275368 5/21 (24%)
C2H2 Zn finger 360..380 CDD:275368 4/23 (17%)
tolA 391..>495 CDD:236545 3/10 (30%)

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