DRSC/TRiP Functional Genomics Resources

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Protein Alignment wor and zld

DIOPT Version :10

Sequence 1:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_608356.1 Gene:zld / 32994 FlyBaseID:FBgn0259789 Length:1596 Species:Drosophila melanogaster


Alignment Length:424 Identity:94/424 - (22%)
Similarity:151/424 - (35%) Gaps:92/424 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 LPP--EEEVMEPEPEPEQHL-PLRYTRDASPTIIKAEPSDEEQFPLRNYNNNLLKSIAEYEDCMK 178
            :||  ...:|.|.|:..|.| ||..|. :..|||.:.|..........|:|.:..|..:....| 
  Fly  1097 MPPTMHMPIMPPPPQCYQQLQPLDPTM-SYHTIIGSGPEAHTGTAGGGYSNQITTSDGQILQLM- 1159

  Fly   179 MQNIKEEIPPIPSPQLFYPPPTPLAEPEDLSVTQRRVLSE--------------------NMNLQ 223
                         |...:.|..||:   ..||..:|...|                    ....|
  Fly  1160 -------------PTSLFAPYAPLS---PYSVAAQRSPQEGDLPPVHTLTTALHAHQQGGQQEAQ 1208

  Fly   224 NVARALLSMQH---MAPQHAPPPIDMEED---QENQDINQLKIKSSNDLYYQCQQCNKCYATYAG 282
            .....:||..:   ::...|.|.::|:..   |.:||....:.:..:....|.||       :..
  Fly  1209 TPTLTVLSTPYSPTVSSSRATPALEMDMATLMQHHQDYEMEQYQMQHQQLDQMQQ-------HQQ 1266

  Fly   283 LVKHQQTHAYESTEYKIIRSQP------GGSGAIVDQTEFCTDQASALIQAANVASAQSMQKPVG 341
            .:.|||.....:.:.:.:..||      ||:         .|...:...:.::|.|.......:.
  Fly  1267 QLDHQQQQQILADQTQTMAQQPLAKKRRGGN---------ATPSTTKRRRNSSVGSTSPHSTTLP 1322

  Fly   342 VPRYHCQDCGKSYSTYSGLSKH-QQFHCPSAEGNQVKKVFSCKNCDKTYVSLGALKMHI---RTH 402
            ..|..|.:|.|.::....|::| :.||  |.|     ..|.|:.|.|.:.|......|:   ||.
  Fly  1323 SGRIKCLECDKEFTKNCYLTQHNKSFH--SGE-----YPFRCQKCGKRFQSEDVYTTHLGRHRTQ 1380

  Fly   403 TLPCKCPICGKAFSRPWLLQGHIRT-HTGEKPFSCQHCNRAFADRSNLRAHMQTHSD---VKKYS 463
            ..|.||.:|.|.|.....|:.|:.. |||.|...|..|.:.|..:.:||.|::||:.   |.|.|
  Fly  1381 DKPHKCELCPKQFHHKTDLRRHVEAIHTGLKQHMCDICEKGFCRKDHLRKHLETHNRPRVVGKKS 1445

  Fly   464 CPTCTKSFSRMSLLAKHLQSGCQTEQSGGPSGSG 497
            ......:.:..::.|        |...||...:|
  Fly  1446 AAAAAAAAAAAAVTA--------TAGLGGAPAAG 1471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 5/19 (26%)
C2H2 Zn finger 317..334 CDD:275368 3/16 (19%)
zf-C2H2 345..367 CDD:395048 5/22 (23%)
C2H2 Zn finger 347..367 CDD:275368 5/20 (25%)
zf-C2H2 380..402 CDD:395048 7/24 (29%)
C2H2 Zn finger 382..402 CDD:275368 6/22 (27%)
zf-C2H2 406..428 CDD:395048 7/22 (32%)
C2H2 Zn finger 408..428 CDD:275368 6/20 (30%)
zf-C2H2 434..456 CDD:395048 6/21 (29%)
C2H2 Zn finger 436..456 CDD:275368 6/19 (32%)
C2H2 Zn finger 464..481 CDD:275368 1/16 (6%)
zldNP_608356.1 zf-C2H2_jaz 552..577 CDD:432381
SUF4-like 1325..>1366 CDD:411020 14/47 (30%)
C2H2 Zn finger 1328..1349 CDD:411020 5/20 (25%)
C2H2 Zn finger 1328..1349 CDD:275368 5/20 (25%)
C2H2 Zn finger 1357..1377 CDD:275368 5/19 (26%)
C2H2 Zn finger 1386..1407 CDD:275368 6/20 (30%)
zf-C2H2 1413..1435 CDD:395048 6/21 (29%)
C2H2 Zn finger 1415..1435 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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