DRSC/TRiP Functional Genomics Resources

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Protein Alignment wor and snai1a

DIOPT Version :9

Sequence 1:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_001300628.1 Gene:snai1a / 30273 ZFINID:ZDB-GENE-990415-255 Length:260 Species:Danio rerio


Alignment Length:141 Identity:88/141 - (62%)
Similarity:105/141 - (74%) Gaps:0/141 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   345 YHCQDCGKSYSTYSGLSKHQQFHCPSAEGNQVKKVFSCKNCDKTYVSLGALKMHIRTHTLPCKCP 409
            ||.|...:...:....:..::....:|.....:..|.||:|.|.|.||||||||||:|||||.||
Zfish   112 YHPQQTSRPRRSNKSRAGQREDKSEAAVTAASRPAFFCKHCPKEYNSLGALKMHIRSHTLPCVCP 176

  Fly   410 ICGKAFSRPWLLQGHIRTHTGEKPFSCQHCNRAFADRSNLRAHMQTHSDVKKYSCPTCTKSFSRM 474
            .|||||||||||:|||||||||:||||.|||||||||||||||:|||:|||||.|.||:::||||
Zfish   177 TCGKAFSRPWLLRGHIRTHTGERPFSCPHCNRAFADRSNLRAHLQTHADVKKYQCSTCSRTFSRM 241

  Fly   475 SLLAKHLQSGC 485
            |||.||..:||
Zfish   242 SLLQKHSAAGC 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368
C2H2 Zn finger 317..334 CDD:275368
zf-C2H2 345..367 CDD:278523 3/21 (14%)
C2H2 Zn finger 347..367 CDD:275368 1/19 (5%)
PHA00732 379..>417 CDD:177300 28/37 (76%)
C2H2 Zn finger 382..402 CDD:275368 15/19 (79%)
zf-C2H2_8 405..482 CDD:292531 63/76 (83%)
zf-C2H2 406..428 CDD:278523 18/21 (86%)
C2H2 Zn finger 408..428 CDD:275368 17/19 (89%)
zf-H2C2_2 421..444 CDD:290200 19/22 (86%)
zf-C2H2 434..456 CDD:278523 19/21 (90%)
C2H2 Zn finger 436..456 CDD:275368 17/19 (89%)
zf-H2C2_2 448..473 CDD:290200 17/24 (71%)
C2H2 Zn finger 464..481 CDD:275368 11/16 (69%)
snai1aNP_001300628.1 C2H2 Zn finger 149..169 CDD:275368 15/19 (79%)
COG5048 <170..>244 CDD:227381 61/73 (84%)
zf-C2H2 173..195 CDD:278523 18/21 (86%)
C2H2 Zn finger 175..195 CDD:275368 17/19 (89%)
zf-H2C2_2 188..211 CDD:290200 19/22 (86%)
zf-C2H2 201..223 CDD:278523 19/21 (90%)
C2H2 Zn finger 203..223 CDD:275368 17/19 (89%)
C2H2 Zn finger 231..247 CDD:275368 10/15 (67%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 52 1.000 Domainoid score I11461
eggNOG 1 0.900 - - E1_KOG2462
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0012001
OrthoInspector 1 1.000 - - mtm6484
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X955
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.770

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