DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wor and ces-1

DIOPT Version :9

Sequence 1:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_492338.1 Gene:ces-1 / 185718 WormBaseID:WBGene00000468 Length:270 Species:Caenorhabditis elegans


Alignment Length:301 Identity:99/301 - (32%)
Similarity:145/301 - (48%) Gaps:40/301 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 IPSPQLFYPPPTPLAEPEDLSVTQRRVLSENMNLQNVARALLSMQHMAPQHAPPPIDMEEDQENQ 253
            |.:|.:...|  .:|.|.|..:.      .|.:.|.....|:|: |:..|.:...........:.
 Worm     2 ITTPNISLTP--TVAPPVDFPII------GNCDFQAQLWHLMSL-HLQMQKSSAASTSSSSSSST 57

  Fly   254 DINQLKIKSSNDLYYQCQQCNKCYATYAGLVKHQQTHAYESTEYKIIRSQPGGSGAIVDQTEFCT 318
            ....|| ||.:.:.      |....:...::..|:....|....:.:.|.|..:         |:
 Worm    58 SSENLK-KSPSSVQ------NTSVFSIDNILNSQKVPKLELENDEDVSSSPSPT---------CS 106

  Fly   319 DQASALIQAANVASAQSMQK--PVGVPRYHCQDCGKSYSTYSGLSKHQQFH----CPSAEGNQVK 377
            .....|....|: ..:|:.|  |....|..|..|||||:|.|.||:|:|.|    .|.|:     
 Worm   107 TTGYTLDSLQNL-DRRSLNKKGPSSHNRCVCDKCGKSYATTSNLSRHKQTHRALDSPHAK----- 165

  Fly   378 KVFSCKNCDKTYVSLGALKMHIRTHTLPCKCPICGKAFSRPWLLQGHIRTHTGEKPFSCQHCNRA 442
               .|.:||:.|||:.||.|||.||....:|.:|||.|||.||||||:|:|||.:||||.||.::
 Worm   166 ---QCPHCDRVYVSMPALSMHILTHNASHECNVCGKRFSRLWLLQGHLRSHTGLRPFSCAHCGKS 227

  Fly   443 FADRSNLRAHMQTHSDVKKYSCPTCTKSFSRMSLLAKHLQS 483
            |||||||||||.||:..|::.|..|.:.|:..:.|.:||::
 Worm   228 FADRSNLRAHMLTHTGDKRFECDKCGRRFALRAYLNRHLET 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 2/19 (11%)
C2H2 Zn finger 317..334 CDD:275368 3/16 (19%)
zf-C2H2 345..367 CDD:278523 12/21 (57%)
C2H2 Zn finger 347..367 CDD:275368 12/19 (63%)
PHA00732 379..>417 CDD:177300 18/37 (49%)
C2H2 Zn finger 382..402 CDD:275368 11/19 (58%)
zf-C2H2_8 405..482 CDD:292531 42/76 (55%)
zf-C2H2 406..428 CDD:278523 14/21 (67%)
C2H2 Zn finger 408..428 CDD:275368 14/19 (74%)
zf-H2C2_2 421..444 CDD:290200 14/22 (64%)
zf-C2H2 434..456 CDD:278523 16/21 (76%)
C2H2 Zn finger 436..456 CDD:275368 14/19 (74%)
zf-H2C2_2 448..473 CDD:290200 12/24 (50%)
C2H2 Zn finger 464..481 CDD:275368 4/16 (25%)
ces-1NP_492338.1 C2H2 Zn finger 167..187 CDD:275368 11/19 (58%)
C2H2 Zn finger 193..213 CDD:275368 14/19 (74%)
zf-H2C2_2 206..229 CDD:290200 14/22 (64%)
zf-C2H2 219..241 CDD:278523 16/21 (76%)
C2H2 Zn finger 221..241 CDD:275368 14/19 (74%)
zf-H2C2_2 233..257 CDD:290200 11/23 (48%)
C2H2 Zn finger 249..268 CDD:275368 6/18 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2462
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24409
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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