DRSC/TRiP Functional Genomics Resources

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Protein Alignment wor and ces-1

DIOPT Version :10

Sequence 1:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_492338.1 Gene:ces-1 / 185718 WormBaseID:WBGene00000468 Length:270 Species:Caenorhabditis elegans


Alignment Length:301 Identity:99/301 - (32%)
Similarity:145/301 - (48%) Gaps:40/301 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 IPSPQLFYPPPTPLAEPEDLSVTQRRVLSENMNLQNVARALLSMQHMAPQHAPPPIDMEEDQENQ 253
            |.:|.:...|  .:|.|.|..:.      .|.:.|.....|:|: |:..|.:...........:.
 Worm     2 ITTPNISLTP--TVAPPVDFPII------GNCDFQAQLWHLMSL-HLQMQKSSAASTSSSSSSST 57

  Fly   254 DINQLKIKSSNDLYYQCQQCNKCYATYAGLVKHQQTHAYESTEYKIIRSQPGGSGAIVDQTEFCT 318
            ....|| ||.:.:.      |....:...::..|:....|....:.:.|.|..:         |:
 Worm    58 SSENLK-KSPSSVQ------NTSVFSIDNILNSQKVPKLELENDEDVSSSPSPT---------CS 106

  Fly   319 DQASALIQAANVASAQSMQK--PVGVPRYHCQDCGKSYSTYSGLSKHQQFH----CPSAEGNQVK 377
            .....|....|: ..:|:.|  |....|..|..|||||:|.|.||:|:|.|    .|.|:     
 Worm   107 TTGYTLDSLQNL-DRRSLNKKGPSSHNRCVCDKCGKSYATTSNLSRHKQTHRALDSPHAK----- 165

  Fly   378 KVFSCKNCDKTYVSLGALKMHIRTHTLPCKCPICGKAFSRPWLLQGHIRTHTGEKPFSCQHCNRA 442
               .|.:||:.|||:.||.|||.||....:|.:|||.|||.||||||:|:|||.:||||.||.::
 Worm   166 ---QCPHCDRVYVSMPALSMHILTHNASHECNVCGKRFSRLWLLQGHLRSHTGLRPFSCAHCGKS 227

  Fly   443 FADRSNLRAHMQTHSDVKKYSCPTCTKSFSRMSLLAKHLQS 483
            |||||||||||.||:..|::.|..|.:.|:..:.|.:||::
 Worm   228 FADRSNLRAHMLTHTGDKRFECDKCGRRFALRAYLNRHLET 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 2/19 (11%)
C2H2 Zn finger 317..334 CDD:275368 3/16 (19%)
zf-C2H2 345..367 CDD:395048 12/21 (57%)
C2H2 Zn finger 347..367 CDD:275368 12/19 (63%)
zf-C2H2 380..402 CDD:395048 11/21 (52%)
C2H2 Zn finger 382..402 CDD:275368 11/19 (58%)
zf-C2H2 406..428 CDD:395048 14/21 (67%)
C2H2 Zn finger 408..428 CDD:275368 14/19 (74%)
zf-C2H2 434..456 CDD:395048 16/21 (76%)
C2H2 Zn finger 436..456 CDD:275368 14/19 (74%)
C2H2 Zn finger 464..481 CDD:275368 4/16 (25%)
ces-1NP_492338.1 C2H2 Zn finger 167..187 CDD:275368 11/19 (58%)
C2H2 Zn finger 193..213 CDD:275368 14/19 (74%)
zf-H2C2_2 206..229 CDD:463886 14/22 (64%)
zf-C2H2 219..241 CDD:395048 16/21 (76%)
C2H2 Zn finger 221..241 CDD:275368 14/19 (74%)
zf-H2C2_2 233..257 CDD:463886 11/23 (48%)
C2H2 Zn finger 249..268 CDD:275368 6/18 (33%)

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