DRSC/TRiP Functional Genomics Resources

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Protein Alignment wor and Scrt1

DIOPT Version :10

Sequence 1:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_570963.1 Gene:Scrt1 / 170729 MGIID:2176606 Length:348 Species:Mus musculus


Alignment Length:196 Identity:95/196 - (48%)
Similarity:117/196 - (59%) Gaps:20/196 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   304 PG----GSGAIVDQTEFCTDQASALIQAANVASAQSMQKPVGVPRYHCQDCGKSYSTYSGLSKHQ 364
            ||    |||:        ..:....:.|...|.|.|.....| .|:.|.:|||:|:|.|.||:|:
Mouse   155 PGTRGSGSGS--------ASRGGTRVGAGTEARAGSGATGAG-GRHACGECGKTYATSSNLSRHK 210

  Fly   365 QFHCPSAEGNQVKKVFSCKNCDKTYVSLGALKMHIRTHTLPCKCPICGKAFSRPWLLQGHIRTHT 429
            |.| .|.:....::   |..|.|.|||:.|:.||:.||.|..||.:||||||||||||||:|:||
Mouse   211 QTH-RSLDSQLARR---CPTCGKVYVSMPAMAMHLLTHDLRHKCGVCGKAFSRPWLLQGHMRSHT 271

  Fly   430 GEKPFSCQHCNRAFADRSNLRAHMQTHSDVKKYSCPTCTKSFSRMSLLAKHLQSGCQTEQSGGPS 494
            |||||.|.||.:||||||||||||||||..|.:.|..|.|||:..|.|.||.:|.|   ..||.|
Mouse   272 GEKPFGCAHCGKAFADRSNLRAHMQTHSAFKHFQCKRCKKSFALKSYLNKHYESAC---FKGGAS 333

  Fly   495 G 495
            |
Mouse   334 G 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368
C2H2 Zn finger 317..334 CDD:275368 2/16 (13%)
zf-C2H2 345..367 CDD:395048 11/21 (52%)
C2H2 Zn finger 347..367 CDD:275368 11/19 (58%)
zf-C2H2 380..402 CDD:395048 9/21 (43%)
C2H2 Zn finger 382..402 CDD:275368 9/19 (47%)
zf-C2H2 406..428 CDD:395048 17/21 (81%)
C2H2 Zn finger 408..428 CDD:275368 16/19 (84%)
zf-C2H2 434..456 CDD:395048 17/21 (81%)
C2H2 Zn finger 436..456 CDD:275368 16/19 (84%)
C2H2 Zn finger 464..481 CDD:275368 8/16 (50%)
Scrt1NP_570963.1 SNAG domain. /evidence=ECO:0000250 1..20
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 130..190 10/43 (23%)
C2H2 Zn finger 193..213 CDD:275368 11/19 (58%)
C2H2 Zn finger 224..241 CDD:275371 8/16 (50%)
COG5048 <245..>313 CDD:227381 48/67 (72%)
C2H2 Zn finger 250..270 CDD:275368 16/19 (84%)
C2H2 Zn finger 278..298 CDD:275368 16/19 (84%)
C2H2 Zn finger 306..322 CDD:275368 7/15 (47%)
Blue background indicates that the domain is not in the aligned region.

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