DRSC/TRiP Functional Genomics Resources

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Protein Alignment wor and si:ch73-299h12.1

DIOPT Version :9

Sequence 1:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_017208438.1 Gene:si:ch73-299h12.1 / 103909394 ZFINID:ZDB-GENE-081031-84 Length:345 Species:Danio rerio


Alignment Length:301 Identity:78/301 - (25%)
Similarity:127/301 - (42%) Gaps:81/301 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 NQDINQLKIKSSNDLYYQCQQCNKCYATYAGLVKHQQTHA----------------YESTEYKII 300
            :..::..:||:     :.|.||.|.:.....|.:|.|.||                |:..|:::|
Zfish    63 DHQLSHSEIKT-----FSCDQCGKTFVLEKHLRQHLQDHAPVKPHVCFCGKSYTTIYKLREHQVI 122

  Fly   301 RSQPGGSGAIVDQTEFCTDQASALIQAANVASAQSMQKPVGVPRYHCQDCGKSYSTYSGLSKHQQ 365
            .::|                                        :.|.|||.::|:.:.|.:||.
Zfish   123 HTEP----------------------------------------HVCSDCGNTFSSLTNLKRHQN 147

  Fly   366 FHCPSAEGNQVKKVFSCKNCDKTYVSLGALKMHIRTHT--LPCKCPICGKAFSRPWLLQGHIRTH 428
            .|..       :|.:.|.:|::::...|.||.|.:.||  .|..|..|||:|.....|..|:|.|
Zfish   148 IHTG-------EKPYQCSHCERSFTQPGGLKAHEKVHTGEKPYVCSDCGKSFGTTSNLNTHMRIH 205

  Fly   429 TGEKPFSCQHCNRAFADRSNLRAHMQTHSDVKKYSCPTCTKSFSRMSLLAKHLQSGCQTEQSGGP 493
            |||||::|..|.::::|:.||..||:.|:..|.:||..|.|||:..:.|..|     |...||..
Zfish   206 TGEKPYTCTQCGKSYSDKGNLNVHMKIHTGEKAFSCSECGKSFAHKNTLKDH-----QLSHSGVK 265

  Fly   494 SGSGGGFDQ-----QQLQQHLQVYEEGHNPHQLYYAGSVGS 529
            ..|....|:     ..|::||.|:.: ..||..:...|.|:
Zfish   266 LFSCDQCDKAFINAAYLKRHLPVHAD-VKPHLCFCGKSYGT 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 7/19 (37%)
C2H2 Zn finger 317..334 CDD:275368 0/16 (0%)
zf-C2H2 345..367 CDD:278523 8/21 (38%)
C2H2 Zn finger 347..367 CDD:275368 8/19 (42%)
PHA00732 379..>417 CDD:177300 14/39 (36%)
C2H2 Zn finger 382..402 CDD:275368 6/19 (32%)
zf-C2H2_8 405..482 CDD:292531 32/76 (42%)
zf-C2H2 406..428 CDD:278523 8/21 (38%)
C2H2 Zn finger 408..428 CDD:275368 8/19 (42%)
zf-H2C2_2 421..444 CDD:290200 11/22 (50%)
zf-C2H2 434..456 CDD:278523 7/21 (33%)
C2H2 Zn finger 436..456 CDD:275368 7/19 (37%)
zf-H2C2_2 448..473 CDD:290200 12/24 (50%)
C2H2 Zn finger 464..481 CDD:275368 6/16 (38%)
si:ch73-299h12.1XP_017208438.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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