DRSC/TRiP Functional Genomics Resources

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Protein Alignment wor and znf1008

DIOPT Version :9

Sequence 1:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_005171144.1 Gene:znf1008 / 101886637 ZFINID:ZDB-GENE-131121-84 Length:390 Species:Danio rerio


Alignment Length:282 Identity:84/282 - (29%)
Similarity:116/282 - (41%) Gaps:70/282 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   268 YQCQQCNKCYATYAGLVKHQQTHAYES--TEYKIIRSQPGGSGAIV--------DQTEFCTDQAS 322
            :.|.||.|.:....||.:|.:.|..|.  |..:..:|.| .||.:.        |:...|.....
Zfish   110 FTCPQCEKSFTNSGGLKRHLRIHTGERPFTCRQCAKSFP-SSGELKRHMRIHSRDRPYTCPQCGK 173

  Fly   323 ALIQAANV---ASAQSMQKPVGVPRYHCQDCGKSYSTYSGLSKHQQFH-------CPS-----AE 372
            :..|...:   ....|.:||     :.|..||||::..|.|..|.:.|       ||.     ||
Zfish   174 SYKQKEVLREHTKTHSGEKP-----FTCTLCGKSFTQQSTLKVHMKVHSGEKLHQCPECGRRFAE 233

  Fly   373 GNQVK---------KVFSCKNCDKTYVSLGALKMHIRTH-------------------------- 402
            ...:|         :.|||:.|:|.:.....||.|:|.|                          
Zfish   234 ACNLKTHLLSHTGERPFSCEKCEKKFFLAVHLKTHMRIHEDERRYVCSFCGKSFLWLNGFKDHQK 298

  Fly   403 ----TLPCKCPICGKAFSRPWLLQGHIRTHTGEKPFSCQHCNRAFADRSNLRAHMQTHSDVKKYS 463
                ..|.:|..|||.|:|...|:.|.|.||||||:.|.||.::|...|.|:.|.:.|:..|.|.
Zfish   299 THIGEKPYECLECGKTFARAAELKVHERIHTGEKPYKCSHCEKSFTQSSGLKVHERVHTGEKPYL 363

  Fly   464 CPTCTKSFSRMSLLAKHLQSGC 485
            ||||.|:|||...|||||:..|
Zfish   364 CPTCGKTFSRYGSLAKHLKKAC 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 7/19 (37%)
C2H2 Zn finger 317..334 CDD:275368 2/19 (11%)
zf-C2H2 345..367 CDD:278523 8/21 (38%)
C2H2 Zn finger 347..367 CDD:275368 8/19 (42%)
PHA00732 379..>417 CDD:177300 16/67 (24%)
C2H2 Zn finger 382..402 CDD:275368 7/19 (37%)
zf-C2H2_8 405..482 CDD:292531 38/76 (50%)
zf-C2H2 406..428 CDD:278523 9/21 (43%)
C2H2 Zn finger 408..428 CDD:275368 9/19 (47%)
zf-H2C2_2 421..444 CDD:290200 12/22 (55%)
zf-C2H2 434..456 CDD:278523 7/21 (33%)
C2H2 Zn finger 436..456 CDD:275368 7/19 (37%)
zf-H2C2_2 448..473 CDD:290200 11/24 (46%)
C2H2 Zn finger 464..481 CDD:275368 11/16 (69%)
znf1008XP_005171144.1 C2H2 Zn finger 56..76 CDD:275368
zf-H2C2_2 68..93 CDD:290200
COG5048 80..>383 CDD:227381 83/278 (30%)
C2H2 Zn finger 84..104 CDD:275368
zf-H2C2_2 96..121 CDD:290200 4/10 (40%)
C2H2 Zn finger 112..132 CDD:275368 7/19 (37%)
zf-H2C2_2 125..147 CDD:290200 5/21 (24%)
C2H2 Zn finger 140..160 CDD:275368 4/20 (20%)
zf-H2C2_2 152..177 CDD:290200 2/24 (8%)
C2H2 Zn finger 168..188 CDD:275368 2/19 (11%)
zf-H2C2_2 181..205 CDD:290200 8/28 (29%)
C2H2 Zn finger 196..216 CDD:275368 8/19 (42%)
zf-H2C2_2 209..232 CDD:290200 5/22 (23%)
C2H2 Zn finger 224..244 CDD:275368 5/19 (26%)
C2H2 Zn finger 252..272 CDD:275368 7/19 (37%)
C2H2 Zn finger 280..300 CDD:275368 0/19 (0%)
C2H2 Zn finger 308..328 CDD:275368 9/19 (47%)
zf-H2C2_2 320..345 CDD:290200 13/24 (54%)
C2H2 Zn finger 336..356 CDD:275368 7/19 (37%)
zf-H2C2_2 349..373 CDD:290200 11/23 (48%)
C2H2 Zn finger 364..382 CDD:275368 12/17 (71%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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