DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wor and si:ch73-40a17.4

DIOPT Version :9

Sequence 1:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_005171145.1 Gene:si:ch73-40a17.4 / 100149710 ZFINID:ZDB-GENE-131127-71 Length:408 Species:Danio rerio


Alignment Length:449 Identity:103/449 - (22%)
Similarity:156/449 - (34%) Gaps:138/449 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 EEVMEPEPEPEQHLPLRYTRDASPTIIKAEPSDEEQFPLRNYNNNLLKSIAEYEDCMKMQNIKEE 185
            |:..:.|.:.|:|..:...:|.     ..||.:.|.....|..|       |.:.|...:|..: 
Zfish     9 EDKSDAEQDAEEHKGMMEVKDE-----HKEPEEAEMNEQMNITN-------EEQSCSSSRNDNQ- 60

  Fly   186 IPPIPSPQLFYPPPTPLAEPED----------LSVTQRRVLSENMNLQNVARALLSMQ------- 233
                          ...||.:.          .|.|:|..|..:|.:....|....:|       
Zfish    61 --------------VSQAETQSKHSFICSECGKSFTRRGHLRIHMIIHTGERPYTCIQCQKSFTC 111

  Fly   234 ----------------HMAPQHAPPPIDMEEDQENQDINQLKIKSSNDLYYQCQQCNKCYATYAG 282
                            .|.|| .......:||.:    ..::| .:.:..:.|.||.|.:.:...
Zfish   112 KGSLKDHCKIHSGEKPFMCPQ-CGWSFARQEDLK----RHIRI-HTGEKPFSCAQCTKSFTSSGD 170

  Fly   283 LVKHQQTHAYESTEYKIIRSQPGGSGAIVDQTEFCTDQASALIQAANVASAQSMQKPVGVPRYHC 347
            |.:|.:.|:.|         :|....    |.:....|...|.:.|.:.|.:.:        :.|
Zfish   171 LRRHVRIHSGE---------RPFSCA----QCKKSFTQKEGLKEHAKIHSGEKL--------FAC 214

  Fly   348 QDCGKSYSTYSGLSKHQQFH-------CPS-----AEGNQVK---------KVFSCKNCDKTYVS 391
            ..||||::....|.:|.:.|       ||.     ||...:|         :.|||:.|:|.:..
Zfish   215 MLCGKSFTHQRSLKRHMKVHSGEKLHQCPECGRRFAEAGNLKTHLLSHTGERPFSCEKCEKKFFL 279

  Fly   392 LGALKMHIRTH------------------------------TLPCKCPICGKAFSRPWLLQGHIR 426
            ...||.|:|.|                              ..|..|..||..|.||..|:.|.|
Zfish   280 AVHLKTHMRIHEDERRYVCSFCGKSFLWLNGFKDHQKTHIGEKPYVCLECGSTFIRPGELKVHER 344

  Fly   427 THTGEKPFSCQHCNRAFADRSNLRAHMQTHSDVKKYSCPTCTKSFSRMSLLAKHLQSGC 485
            .||||||:.|.||.::|.....|:.|.:.|:..|.|.||||.|:|||...|.|||:..|
Zfish   345 IHTGEKPYKCSHCEKSFTQSGALKIHKRVHTGEKPYLCPTCGKTFSRYGNLGKHLKKAC 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 6/19 (32%)
C2H2 Zn finger 317..334 CDD:275368 4/16 (25%)
zf-C2H2 345..367 CDD:278523 7/21 (33%)
C2H2 Zn finger 347..367 CDD:275368 7/19 (37%)
PHA00732 379..>417 CDD:177300 15/67 (22%)
C2H2 Zn finger 382..402 CDD:275368 7/19 (37%)
zf-C2H2_8 405..482 CDD:292531 36/76 (47%)
zf-C2H2 406..428 CDD:278523 9/21 (43%)
C2H2 Zn finger 408..428 CDD:275368 9/19 (47%)
zf-H2C2_2 421..444 CDD:290200 12/22 (55%)
zf-C2H2 434..456 CDD:278523 6/21 (29%)
C2H2 Zn finger 436..456 CDD:275368 6/19 (32%)
zf-H2C2_2 448..473 CDD:290200 11/24 (46%)
C2H2 Zn finger 464..481 CDD:275368 10/16 (63%)
si:ch73-40a17.4XP_005171145.1 COG5048 <40..193 CDD:227381 30/193 (16%)
C2H2 Zn finger 74..94 CDD:275368 5/19 (26%)
zf-H2C2_2 86..111 CDD:290200 4/24 (17%)
C2H2 Zn finger 102..122 CDD:275368 1/19 (5%)
C2H2 Zn finger 130..150 CDD:275368 5/25 (20%)
zf-H2C2_2 142..167 CDD:290200 6/29 (21%)
zf-C2H2_8 155..235 CDD:292531 21/100 (21%)
C2H2 Zn finger 158..178 CDD:275368 6/19 (32%)
zf-H2C2_2 170..195 CDD:290200 6/37 (16%)
C2H2 Zn finger 186..206 CDD:275368 4/23 (17%)
C2H2 Zn finger 214..234 CDD:275368 7/19 (37%)
zf-H2C2_2 226..250 CDD:290200 5/23 (22%)
C2H2 Zn finger 242..262 CDD:275368 5/19 (26%)
C2H2 Zn finger 270..290 CDD:275368 7/19 (37%)
C2H2 Zn finger 298..318 CDD:275368 0/19 (0%)
C2H2 Zn finger 326..346 CDD:275368 9/19 (47%)
zf-H2C2_2 338..363 CDD:290200 13/24 (54%)
C2H2 Zn finger 354..374 CDD:275368 6/19 (32%)
zf-H2C2_2 366..391 CDD:290200 11/24 (46%)
C2H2 Zn finger 382..400 CDD:275368 11/17 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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