DRSC/TRiP Functional Genomics Resources

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Protein Alignment esg and scrt1a

DIOPT Version :9

Sequence 1:NP_476600.1 Gene:esg / 34903 FlyBaseID:FBgn0001981 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_001107073.1 Gene:scrt1a / 564658 ZFINID:ZDB-GENE-080219-30 Length:279 Species:Danio rerio


Alignment Length:256 Identity:102/256 - (39%)
Similarity:137/256 - (53%) Gaps:29/256 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 APISPAYSENSYYSMRSMTP-----ESSCSSSLPEDLSLK---HKNLNLNLNTSQPGEQAAAKTG 287
            |.||..:.|.:|.| ..|||     ||.....:|....:.   |.:.....:......|:...:|
Zfish    29 ADISLRFHEKAYIS-DYMTPAPYDGESDSGIKVPSPGPIYDSIHSDYGAPDSDQPDSPQSEISSG 92

  Fly   288 DMSPET-------------MPNASAKKDKNQP---PRYQCPDCQKSYSTFSGLTKHQQFHCPAAE 336
            .::.:|             ....|.:|..:.|   .|:.|.:|.|:|:|.|.|::|:|.| .:.:
Zfish    93 YINGDTAVSEGYTVDAFFITDGRSRRKAISSPRTLQRHTCNECGKTYATSSNLSRHKQTH-RSLD 156

  Fly   337 GNQVKKSFSCKDCDKTYVSLGALKMHIRTHTLPCKCNLCGKAFSRPWLLQGHIRTHTGEKPFSCQ 401
            ....||   |..|.|.|||:.|:.||:.||.|..||::||||||||||||||:|:|||||||.|.
Zfish   157 SKMAKK---CPTCGKVYVSMPAMAMHLLTHDLKHKCDICGKAFSRPWLLQGHMRSHTGEKPFGCA 218

  Fly   402 HCHRAFADRSNLRAHLQTHSDIKKYSCTSCSKTFSRMSLLTKHSEGGCPGGSAGSSSSSEL 462
            ||.:|||||||||||:||||..|.|.|..|:|||:..|.|.||.|..|..|:....|..|:
Zfish   219 HCGKAFADRSNLRAHMQTHSAFKHYKCKRCNKTFALKSYLNKHYESACFKGAFAPLSPMEV 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esgNP_476600.1 zf-C2H2 309..331 CDD:278523 9/21 (43%)
C2H2 Zn finger 311..331 CDD:275370 9/19 (47%)
zf-C2H2 344..366 CDD:278523 9/21 (43%)
C2H2 Zn finger 346..366 CDD:275368 9/19 (47%)
zf-C2H2 370..392 CDD:278523 17/21 (81%)
C2H2 Zn finger 372..392 CDD:275368 16/19 (84%)
zf-H2C2_2 385..408 CDD:290200 16/22 (73%)
zf-C2H2 398..420 CDD:278523 16/21 (76%)
C2H2 Zn finger 400..420 CDD:275368 15/19 (79%)
C2H2 Zn finger 428..444 CDD:275368 7/15 (47%)
scrt1aNP_001107073.1 zf-C2H2 130..152 CDD:278523 9/21 (43%)
C2H2 Zn finger 132..152 CDD:275368 9/19 (47%)
C2H2 Zn finger 163..180 CDD:275371 8/16 (50%)
COG5048 187..>263 CDD:227381 53/75 (71%)
zf-C2H2 187..209 CDD:278523 17/21 (81%)
C2H2 Zn finger 189..209 CDD:275368 16/19 (84%)
C2H2 Zn finger 217..237 CDD:275368 15/19 (79%)
zf-C2H2 217..237 CDD:278523 15/19 (79%)
zf-H2C2_2 229..253 CDD:290200 15/23 (65%)
C2H2 Zn finger 245..261 CDD:275368 7/15 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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