DRSC/TRiP Functional Genomics Resources

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Protein Alignment esg and sqz

DIOPT Version :10

Sequence 1:NP_476600.1 Gene:esg / 34903 FlyBaseID:FBgn0287768 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_524403.1 Gene:sqz / 42300 FlyBaseID:FBgn0010768 Length:535 Species:Drosophila melanogaster


Alignment Length:316 Identity:82/316 - (25%)
Similarity:132/316 - (41%) Gaps:61/316 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 PSSPSDSLGSLSPPPHHYLH---GRASSVSPPMRSEIIH--RPI-------------------GV 203
            |::|:      ..|...|||   .:..|:.....::::|  :|.                   |:
  Fly     5 PTAPN------GVPSGDYLHRSIDQLRSLGHLTTAQLVHDYKPFNISEFRQNVAERLDYSLKNGL 63

  Fly   204 RQHRFLPYPQMPGYPSLGGYTHTHHHHAPISPAYSENSYYSMRSMTPESSCSSSLPEDLSLKH-- 266
            .||:.....:...:|......|.||......|              |:...|.|.|......|  
  Fly    64 VQHQQQMVMEQQPHPDQQQQQHLHHPQQQQHP--------------PQLKVSYSAPNSPPTPHEQ 114

  Fly   267 KNLNLNLNTSQPGEQAAAKTGDMSPETMPNASAKK-DKNQPPRYQCPDCQKSYSTFSGLTKHQQF 330
            :....:.|.|.|.:|.::.:|..|..:.|...::: |.:|...|:|..|.||::..|.|::|.:.
  Fly   115 QEQKYDPNRSPPRQQMSSASGSGSNGSSPEEESRRGDGDQAKPYKCGSCSKSFANSSYLSQHTRI 179

  Fly   331 HCPAAEGNQVKKSFSCKDCDKTYVSLGALKMHIRTHT--LPCKCNL--CGKAFSRPWLLQGHIRT 391
            |...       |.:.|:.|.:.:..|..|:.||||||  .|.||..  |.||||:...||.|.|.
  Fly   180 HLGI-------KPYRCEICQRKFTQLSHLQQHIRTHTGDKPYKCRHAGCPKAFSQLSNLQSHSRC 237

  Fly   392 HTGEKPFSCQHCHRAFADRSNLRAHLQTHSD---IKKYSCTSCSKTFSRMSLLTKH 444
            |..:|||.|..|::.|:|...|..|:..|.|   :|.:.|..|.|::::.:.|.||
  Fly   238 HQTDKPFKCNSCYKCFSDEMTLLEHIPKHKDSKHLKTHICNLCGKSYTQETYLQKH 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esgNP_476600.1 KREPA <278..>329 CDD:483960 15/51 (29%)
zf-C2H2 309..331 CDD:395048 8/21 (38%)
C2H2 Zn finger 311..331 CDD:275370 7/19 (37%)
zf-C2H2 344..366 CDD:395048 7/21 (33%)
C2H2 Zn finger 346..366 CDD:275368 7/19 (37%)
zf-C2H2 370..392 CDD:395048 11/23 (48%)
C2H2 Zn finger 372..392 CDD:275368 10/21 (48%)
zf-H2C2_2 385..408 CDD:463886 10/22 (45%)
zf-C2H2 398..420 CDD:395048 7/21 (33%)
C2H2 Zn finger 400..420 CDD:275368 6/19 (32%)
C2H2 Zn finger 428..444 CDD:275368 4/15 (27%)
sqzNP_524403.1 C2H2 Zn finger 160..180 CDD:275368 7/19 (37%)
COG5048 184..>288 CDD:227381 39/103 (38%)
C2H2 Zn finger 188..208 CDD:275368 7/19 (37%)
C2H2 Zn finger 216..238 CDD:275368 10/21 (48%)
C2H2 Zn finger 246..266 CDD:275368 6/19 (32%)
C2H2 Zn finger 277..297 CDD:275368 6/17 (35%)

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