DRSC/TRiP Functional Genomics Resources

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Protein Alignment esg and snai1

DIOPT Version :9

Sequence 1:NP_476600.1 Gene:esg / 34903 FlyBaseID:FBgn0001981 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_989267.1 Gene:snai1 / 394880 XenbaseID:XB-GENE-479970 Length:262 Species:Xenopus tropicalis


Alignment Length:288 Identity:137/288 - (47%)
Similarity:172/288 - (59%) Gaps:42/288 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 PHHYLHGRASSVS-PPMRSEIIHRPIGVRQHRFLPYPQMPGYP-----SLGGYTHTHHHHAP--- 232
            |..:|..:..|.| .|..||:..:.:.:....:..|| :|..|     :.|.|      :.|   
 Frog     2 PRSFLVKKHFSASKKPNYSELESQTVYISPFIYDKYP-LPVIPQPEILTTGAY------YTPLVW 59

  Fly   233 ----ISPAYSENSYYSMRSMTPESSCSSSLPEDLSLKHKNLNLNLNTSQPGEQAAAKTGDMSPET 293
                ::..::....|....::|.||..||.|.||:......:....||.|...|::.|       
 Frog    60 DTSLLTTFFTSEPDYKKSPISPSSSDDSSKPLDLTSFSSEDDEGGKTSDPPSPASSAT------- 117

  Fly   294 MPNASAKKDKNQPPRYQCPDCQKSYSTFSGLTKHQQFHCPAAEGNQVKKSFSCKDCDKTYVSLGA 358
                       :..::||..|.||||||:||:||:|.||    .:|.:||||||.|:|.||||||
 Frog   118 -----------EAEKFQCNQCSKSYSTFAGLSKHKQLHC----DSQARKSFSCKYCEKEYVSLGA 167

  Fly   359 LKMHIRTHTLPCKCNLCGKAFSRPWLLQGHIRTHTGEKPFSCQHCHRAFADRSNLRAHLQTHSDI 423
            ||||||:|||||.|.:||||||||||||||||||||||||||.||:||||||||||||||||||:
 Frog   168 LKMHIRSHTLPCVCKICGKAFSRPWLLQGHIRTHTGEKPFSCTHCNRAFADRSNLRAHLQTHSDV 232

  Fly   424 KKYSCTSCSKTFSRMSLLTKHSEGGCPG 451
            |||.|.:||:||||||||.||.|.||.|
 Frog   233 KKYQCKNCSRTFSRMSLLHKHEETGCTG 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esgNP_476600.1 zf-C2H2 309..331 CDD:278523 14/21 (67%)
C2H2 Zn finger 311..331 CDD:275370 13/19 (68%)
zf-C2H2 344..366 CDD:278523 18/21 (86%)
C2H2 Zn finger 346..366 CDD:275368 16/19 (84%)
zf-C2H2 370..392 CDD:278523 18/21 (86%)
C2H2 Zn finger 372..392 CDD:275368 17/19 (89%)
zf-H2C2_2 385..408 CDD:290200 20/22 (91%)
zf-C2H2 398..420 CDD:278523 19/21 (90%)
C2H2 Zn finger 400..420 CDD:275368 17/19 (89%)
C2H2 Zn finger 428..444 CDD:275368 11/15 (73%)
snai1NP_989267.1 DUF4764 <97..>156 CDD:318226 26/80 (33%)
C2H2 Zn finger 124..144 CDD:275370 13/19 (68%)
C2H2 Zn finger 155..175 CDD:275368 16/19 (84%)
COG5048 <176..>252 CDD:227381 65/75 (87%)
C2H2 Zn finger 181..201 CDD:275368 17/19 (89%)
C2H2 Zn finger 209..229 CDD:275368 17/19 (89%)
C2H2 Zn finger 237..253 CDD:275368 11/15 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11448
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 255 1.000 Inparanoid score I3084
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004977
OrthoInspector 1 1.000 - - mtm9353
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3546
SonicParanoid 1 1.000 - - X955
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.990

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