DRSC/TRiP Functional Genomics Resources

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Protein Alignment esg and Scrt1

DIOPT Version :9

Sequence 1:NP_476600.1 Gene:esg / 34903 FlyBaseID:FBgn0001981 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_001124042.1 Gene:Scrt1 / 366951 RGDID:1306236 Length:348 Species:Rattus norvegicus


Alignment Length:335 Identity:114/335 - (34%)
Similarity:159/335 - (47%) Gaps:75/335 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 DLIAPSSPSDS------LGSLSPPPHH------YLHGRASSVSPPMRSEIIHRPIGVRQHRFLPY 211
            |.:.|:|..|.      |...||.|.:      .|...||..:||                  |.
  Rat    43 DYVGPASVYDGDAEAALLKGPSPEPMYAAAVRGELGPAASGSAPP------------------PT 89

  Fly   212 PQMPGYPSLGGYTHTHHHHAPISPAYSENSYYSMRSMTPESSCSSSLPEDLSLKHKNLNLNLNTS 276
            |:.....:.|||.   :..|.:|..|:.::::    :|...|           :.|..|.|..::
  Rat    90 PRPELATAAGGYI---NGDAAVSEGYAADAFF----ITDGRS-----------RRKAANANAASA 136

  Fly   277 QPGEQAAAKTGDM----SPETMPNAS-----------AKKDKNQPP-------RYQCPDCQKSYS 319
            ......||...|.    .|.|..:.|           |..:....|       |:.|.:|.|:|:
  Rat   137 PSTASVAAPDSDAGGGGGPGTRGSGSGSASRGGTRVGAGTEARAGPGATGAGGRHACGECGKTYA 201

  Fly   320 TFSGLTKHQQFHCPAAEGNQVKKSFSCKDCDKTYVSLGALKMHIRTHTLPCKCNLCGKAFSRPWL 384
            |.|.|::|:|.|  .:..:|:.:  .|..|.|.|||:.|:.||:.||.|..||.:||||||||||
  Rat   202 TSSNLSRHKQTH--RSLDSQLAR--RCPTCGKVYVSMPAMAMHLLTHDLRHKCGVCGKAFSRPWL 262

  Fly   385 LQGHIRTHTGEKPFSCQHCHRAFADRSNLRAHLQTHSDIKKYSCTSCSKTFSRMSLLTKHSEGGC 449
            ||||:|:|||||||.|.||.:|||||||||||:||||..|.:.|..|.|:|:..|.|.||.|..|
  Rat   263 LQGHMRSHTGEKPFGCAHCGKAFADRSNLRAHMQTHSAFKHFQCKRCKKSFALKSYLNKHYESAC 327

  Fly   450 -PGGSAGSSS 458
             .||::|.::
  Rat   328 FKGGASGPAT 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esgNP_476600.1 zf-C2H2 309..331 CDD:278523 9/21 (43%)
C2H2 Zn finger 311..331 CDD:275370 9/19 (47%)
zf-C2H2 344..366 CDD:278523 9/21 (43%)
C2H2 Zn finger 346..366 CDD:275368 9/19 (47%)
zf-C2H2 370..392 CDD:278523 17/21 (81%)
C2H2 Zn finger 372..392 CDD:275368 16/19 (84%)
zf-H2C2_2 385..408 CDD:290200 16/22 (73%)
zf-C2H2 398..420 CDD:278523 16/21 (76%)
C2H2 Zn finger 400..420 CDD:275368 15/19 (79%)
C2H2 Zn finger 428..444 CDD:275368 6/15 (40%)
Scrt1NP_001124042.1 C2H2 Zn finger 193..213 CDD:275368 9/19 (47%)
C2H2 Zn finger 224..241 CDD:275371 8/16 (50%)
COG5048 <245..>313 CDD:227381 47/67 (70%)
C2H2 Zn finger 250..270 CDD:275368 16/19 (84%)
C2H2 Zn finger 278..298 CDD:275368 15/19 (79%)
C2H2 Zn finger 306..322 CDD:275368 6/15 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2462
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 179 1.000 Inparanoid score I3910
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.860

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