DRSC/TRiP Functional Genomics Resources

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Protein Alignment esg and lst-5

DIOPT Version :10

Sequence 1:NP_476600.1 Gene:esg / 34903 FlyBaseID:FBgn0287768 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_872063.2 Gene:lst-5 / 353399 WormBaseID:WBGene00016890 Length:346 Species:Caenorhabditis elegans


Alignment Length:274 Identity:67/274 - (24%)
Similarity:104/274 - (37%) Gaps:53/274 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 PAYSEN-----SYYSMRSMTPESSCSSSL--------PEDLSLKHKNLNLNLNTSQPGEQAAAKT 286
            |.:.|:     .|.|.||   :.:.:|||        .|:..:|.:.....|:..: ||.:....
 Worm     9 PKFCESLEETKDYLSKRS---DRTINSSLKHKDDLQFQEEFVVKEEEEEEELSLER-GESSNVHP 69

  Fly   287 GDM-----------SPETM---PNASAKKDKNQPPR---YQCPDCQKSYSTFSGLTKH-QQFHCP 333
            .|.           |.:||   |.....:.|.:..|   |||.:|.:.::....|..| .|:|..
 Worm    70 SDAHGYLGMCDFEDSDDTMMPVPKREMTRQKFRRFRHKEYQCDECDRMFTLKHNLQNHFVQYHMG 134

  Fly   334 AAEGNQVKKSFSCKDCDKTYVSLGALKMH-IRTHTL---PCKCNLCGKAFSRPWLLQGHIRTHTG 394
            ....::...|..|..|.|.|.::..|..| :..|..   ..:|..|.:.|.....||.|::.|..
 Worm   135 CKTLHKACVSSKCDICGKIYSAVSVLAEHMLNEHNRYLDQIECPDCHEFFLTQTALQKHMKEHKR 199

  Fly   395 EKPFSCQHCH----RAFADRSN--LRAHLQTHSDIKKYSCTSCSKTFSRMSLLTKHS---EGGCP 450
            |:    :||.    |....|.|  |..|::.....|:.||..|:..|.::|...||.   |.|.|
 Worm   200 EE----KHCPYKECRGIKFRFNRELNEHVRLQHKSKELSCCVCNMVFRQLSAKIKHEKTHEKGSP 260

  Fly   451 -GGSAGSSSSSELN 463
             .....||..|.:|
 Worm   261 ISNILKSSKCSAVN 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esgNP_476600.1 KREPA <278..>329 CDD:483960 15/68 (22%)
zf-C2H2 309..331 CDD:395048 7/22 (32%)
C2H2 Zn finger 311..331 CDD:275370 5/20 (25%)
zf-C2H2 344..366 CDD:395048 6/22 (27%)
C2H2 Zn finger 346..366 CDD:275368 6/20 (30%)
zf-C2H2 370..392 CDD:395048 6/21 (29%)
C2H2 Zn finger 372..392 CDD:275368 6/19 (32%)
zf-H2C2_2 385..408 CDD:463886 8/26 (31%)
zf-C2H2 398..420 CDD:395048 7/27 (26%)
C2H2 Zn finger 400..420 CDD:275368 7/25 (28%)
C2H2 Zn finger 428..444 CDD:275368 4/15 (27%)
lst-5NP_872063.2 C2H2 Zn finger 111..132 CDD:275368 5/20 (25%)
C2H2 Zn finger 147..168 CDD:275368 6/20 (30%)
C2H2 Zn finger 177..197 CDD:275368 6/19 (32%)
C2H2 Zn finger 208..227 CDD:275368 5/18 (28%)
C2H2 Zn finger 235..255 CDD:275368 6/19 (32%)

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