DRSC/TRiP Functional Genomics Resources

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Protein Alignment esg and Snai3

DIOPT Version :9

Sequence 1:NP_476600.1 Gene:esg / 34903 FlyBaseID:FBgn0001981 Length:470 Species:Drosophila melanogaster
Sequence 2:XP_008770833.1 Gene:Snai3 / 307919 RGDID:1309658 Length:328 Species:Rattus norvegicus


Alignment Length:259 Identity:119/259 - (45%)
Similarity:140/259 - (54%) Gaps:51/259 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 HAPISPAYSENSYYSMRSMTPESSCSS----SLPEDLSLKHKNLNLNLNTSQPGEQAAAKTGDMS 290
            |.|...|.|..|    ..:.|..|.|:    |||   .|.|.  ...|.||.|..|..:..|..:
  Rat    83 HLPDKEASSNPS----DPLQPWDSTSAIACVSLP---LLPHH--GETLGTSGPEPQETSLVGPRA 138

  Fly   291 PETMPNASAKKDKNQPP--------------------------------RYQCPDCQKSYSTFSG 323
            .:. |:.:.|...|.||                                .::|..|.:.|.|.:|
  Rat   139 GQA-PSVTLKDSFNLPPVLVLPTRWPPILGSDGALDEHLRAEGTSRVPGSFECIHCHRPYQTLAG 202

  Fly   324 LTKHQQFHCPAAEGNQVKKSFSCKDCDKTYVSLGALKMHIRTHTLPCKCNLCGKAFSRPWLLQGH 388
            |.:|||.||....|    .:|:|:.|||.|.||||||||||||||||.|.:||||||||||||||
  Rat   203 LARHQQLHCHLPTG----CAFTCRYCDKEYASLGALKMHIRTHTLPCVCKVCGKAFSRPWLLQGH 263

  Fly   389 IRTHTGEKPFSCQHCHRAFADRSNLRAHLQTHSDIKKYSCTSCSKTFSRMSLLTKHSEGG-CPG 451
            |||||||||::|.||.||||||||||||||||:..|||.|..|.|.|||||||.:|.:.| |||
  Rat   264 IRTHTGEKPYTCSHCSRAFADRSNLRAHLQTHAGTKKYRCALCPKAFSRMSLLVRHEDAGCCPG 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esgNP_476600.1 zf-C2H2 309..331 CDD:278523 9/21 (43%)
C2H2 Zn finger 311..331 CDD:275370 9/19 (47%)
zf-C2H2 344..366 CDD:278523 16/21 (76%)
C2H2 Zn finger 346..366 CDD:275368 15/19 (79%)
zf-C2H2 370..392 CDD:278523 18/21 (86%)
C2H2 Zn finger 372..392 CDD:275368 17/19 (89%)
zf-H2C2_2 385..408 CDD:290200 18/22 (82%)
zf-C2H2 398..420 CDD:278523 17/21 (81%)
C2H2 Zn finger 400..420 CDD:275368 17/19 (89%)
C2H2 Zn finger 428..444 CDD:275368 10/15 (67%)
Snai3XP_008770833.1 C2H2 Zn finger 190..210 CDD:275370 9/19 (47%)
C2H2 Zn finger 221..241 CDD:275368 15/19 (79%)
zf-C2H2 245..267 CDD:278523 18/21 (86%)
C2H2 Zn finger 247..267 CDD:275368 17/19 (89%)
COG5048 250..>295 CDD:227381 40/44 (91%)
zf-H2C2_2 260..283 CDD:290200 18/22 (82%)
zf-C2H2 273..295 CDD:278523 17/21 (81%)
C2H2 Zn finger 275..295 CDD:275368 17/19 (89%)
zf-H2C2_2 287..312 CDD:290200 16/24 (67%)
C2H2 Zn finger 303..319 CDD:275368 10/15 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11362
eggNOG 1 0.900 - - E1_KOG2462
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8936
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X955
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.770

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