DRSC/TRiP Functional Genomics Resources

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Protein Alignment nht and TAF4B

DIOPT Version :10

Sequence 1:NP_523574.4 Gene:nht / 34902 FlyBaseID:FBgn0041103 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_174093.3 Gene:TAF4B / 839665 AraportID:AT1G27720 Length:720 Species:Arabidopsis thaliana


Alignment Length:269 Identity:54/269 - (20%)
Similarity:96/269 - (35%) Gaps:89/269 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LPDSGSQDASKAKVSIKKNQRASFFDRSSIYKKIMKHLSQGNQADDI--NISEQEWLLDSFLAAL 87
            |.|||.          |||.|.|         |..:.|..|.:...:  .|..|..|.:....:.
plant   481 LLDSGP----------KKNDRVS---------KAYRRLVHGEEERTLLQKIPLQRKLTEIMGKSG 526

  Fly    88 ETYMKHVVKKTIELC-EHRTSYHLHN----------DERC----VMKNDMRVTMMFL-------- 129
            ..::.|.|::.:.|| |.|....|.|          .|:|    .:.:|:|..:..:        
plant   527 LKHIDHDVERCLSLCVEERMRGLLFNIIRISKQRTDAEKCRNRTFITSDIRKEINEMNQKVKEEW 591

  Fly   130 ------------NDLEIADYGSSDDETGFYRKRRAENIDEERKVARLESVNDTALLAISG----- 177
                        ||.|..|..|::        .:|...||:::  |.::.|.....|:.|     
plant   592 EKKHSGEEKNKENDTEKEDQRSNE--------VKANKKDEDKE--RAKAANVAVRAAVGGDDRFS 646

  Fly   178 ----------RKRPGEQLAPESAPSGSKVAKLTGAP-IQRACAPRFKHMNIRDVLQFMEEDRRYA 231
                      |..||.....:....|::..|..|.| :.|:       ::::||:..:|::.:.:
plant   647 KWKLMAEARQRSSPGPGRNSKKLSGGTQFGKNQGLPKVVRS-------ISVKDVIAVVEKEPQMS 704

  Fly   232 RSNMLFEAY 240
            ||.:|:..|
plant   705 RSTLLYRVY 713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nhtNP_523574.4 TAF4 <85..237 CDD:461598 37/202 (18%)
TAF4BNP_174093.3 RST 87..145 CDD:432383
TAF4 463..711 CDD:461598 53/265 (20%)
Blue background indicates that the domain is not in the aligned region.

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