DRSC/TRiP Functional Genomics Resources

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Protein Alignment nht and Taf4b

DIOPT Version :10

Sequence 1:NP_523574.4 Gene:nht / 34902 FlyBaseID:FBgn0041103 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_001093919.1 Gene:Taf4b / 72504 MGIID:2152345 Length:855 Species:Mus musculus


Alignment Length:260 Identity:56/260 - (21%)
Similarity:106/260 - (40%) Gaps:51/260 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 INDLILPDSGSQDASKAKV----------SIKKNQRASFFDRSSIYKKIM----KHLSQGNQADD 70
            |||:......:.|...|.:          .|:..:...|....::.|:|:    ||......:|.
Mouse   610 INDVTFMAEVNLDEENACILAAHSDFVGTLIQSCKEEPFLVIGALQKRILDIGKKHDITELNSDA 674

  Fly    71 INISEQEWLLDSFLAALETYMKHVVKKTIELCEHRTSYHLHNDERCVMKNDMRVTMMFL------ 129
            :|:...         |.:..::.:::|...:.:||.:.: ...|..::..|.|..:.||      
Mouse   675 VNLISH---------ATQERLRGLLEKLTTIAQHRMTIY-KGSENYILSTDTRSQLKFLEKLDQL 729

  Fly   130 ----NDLEIADY--------GSSDDETGFYRKRRAENIDEERKVARLE--SVNDTALLAISGRKR 180
                .|||..:.        .:.:|......|::|:.: ::.::|:::  ..|.|||.||..||:
Mouse   730 EKQRKDLEEREMLLKAAKSRSNKEDPEQLRLKQKAKEL-QQLELAQIQYRDANLTALAAIGPRKK 793

  Fly   181 PGEQLAPES---APSGSKVAKLTGAPIQRACAPRFKHMNIRDVLQFMEEDRRYARSNMLFEAYLK 242
            ...:...||   .||.|..:.||..   :...||...:.:||::..||::|....|..|:.|.||
Mouse   794 RPLESGNESFKDNPSTSGTSSLTAT---KPFRPRITRICLRDLIFCMEQEREMKYSRALYLALLK 855

  Fly   243  242
            Mouse   856  855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nhtNP_523574.4 TAF4 <85..237 CDD:461598 39/174 (22%)
Taf4bNP_001093919.1 PRK12323 <2..>91 CDD:481241
Sufficient for interaction with ZNF628. /evidence=ECO:0000269|PubMed:31932482 99..240
TAFH 257..344 CDD:462195
Required for interaction with P65/RELA. /evidence=ECO:0000250|UniProtKB:Q92750 504..526
Nuclear export signal. /evidence=ECO:0000250|UniProtKB:Q92750 509..549
TAF4 610..850 CDD:461598 52/253 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 793..817 6/23 (26%)
Required for interaction with TAF12. /evidence=ECO:0000250|UniProtKB:Q92750 823..855 10/31 (32%)
Blue background indicates that the domain is not in the aligned region.

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