Protein Alignment nht and Taf4

DIOPT Version :10

• Sequence 1: NP_523574.4
• Gene: nht / 34902
• FlyBaseID: FBgn0041103
• Length: 245
• Species: Drosophila melanogaster
• Sequence 2: NP_001389099.1
• Gene: Taf4 / 682097
• RGDID: 1588072
• Length: 1040
• Species: Rattus norvegicus
• Alignment Length: 324
• Identity: 71/324 - (21%)
• Similarity: 117/324 - (36%)
• Gaps: 98/324 - (30%)

  Fly     4 ISLEVPIQPYAGQLL---IINDLILPDS------GSQDASKAKVSIKKNQRASFFDRSSIYKKIM 59
            |.|..|.|....||.   ::...:||.:      .:|.|:..|..:|:....||.|...|
  Rat   730 IMLTTPQQIQLNQLQPVPVVKPTVLPGTKALSTVSAQAAAAQKNKLKEPGGGSFRDDDDI----- 789

  Fly    60 KHLSQGNQADDINISEQEWLL-----------------DSFL-------AALETYMKHVVKK--- 97
               :.......:|:||:...:                 |:||       ..||...||.:.:
  Rat   790 ---NDVASMAGVNLSEESARILATNSELVGTLTRSCKDDTFLLPAPLQRRILEIGKKHGITELHP 851

  Fly    98 -TIELCEHRTSYHLHN------------------DERCVMKNDMRVTMMFLNDLEIADYGSSDDE 143
             .:....|.|...|.|                  |:|....:|:|..:.|...|:..:....|::
  Rat   852 DVVSYVSHATQQRLQNLVEKISETAQQKNFSYKDDDRYEQASDVRAQLKFFEQLDQIEKQRKDEQ 916

  Fly   144 TG--FYRKRRAENIDEERKVARLE-----------------SVNDTALLAISGRKR-------PG 182
            ..  ..|..::.:..|:.:..||:                 ..|.|||.||..||:       ||
  Rat   917 EREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDCAGPG 981

  Fly   183 ---EQLAPESA-PSGSKVAKLTGAPIQRACAPRFKHMNIRDVLQFMEEDRRYARSNMLFEAYLK 242
               |...|.:| |.||.|    |.| ::....|...:|:||::..:|.:|..:.|.:|::|:||
  Rat   982 SGAEGSGPGAAVPGGSGV----GTP-RQFTRQRITRVNLRDLIFCLENERETSHSLLLYKAFLK 1040

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nht	NP_523574.4	TAF4	<85..237	CDD:461598	45/203 (22%)
Taf4	NP_001389099.1	TAFH	548..631	CDD:462195
		TAF4	789..1037	CDD:461598	53/260 (20%)