DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cul3 and CDC53

DIOPT Version :9

Sequence 1:NP_723909.2 Gene:Cul3 / 34896 FlyBaseID:FBgn0261268 Length:934 Species:Drosophila melanogaster
Sequence 2:NP_010150.1 Gene:CDC53 / 851424 SGDID:S000002290 Length:815 Species:Saccharomyces cerevisiae


Alignment Length:858 Identity:201/858 - (23%)
Similarity:357/858 - (41%) Gaps:165/858 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 VETIWASLKNAIQEI--QKKNNSGLS-----------FEQLYRNAYNMVLHKH------------ 228
            :|..|..::..|.:|  .:||.:..|           :.::|...||..::|.            
Yeast    11 LEATWNFIEPGINQILGNEKNQASTSKRVYKILSPTMYMEVYTAIYNYCVNKSRSSGHFSTDSRT 75

  Fly   229 -------GNRLYYGLREVVSEHLEHKVRADVLEALHSN---FLPKLNQAWTDHQTSMVMIRDILM 283
                   |:.:|        |.|::.::..:|....||   ||....:.|.......:.:.....
Yeast    76 GQSTILVGSEIY--------EKLKNYLKNYILNFKQSNSETFLQFYVKRWKRFTIGAIFLNHAFD 132

  Fly   284 YMDRVYVQ------QREVDNVYNLGLILFRDQVVRYSEIQKALREKLLGMVMEERHGEAINHLAI 342
            ||:|.:||      :|.:.:|..|.|:.:::  |.:...:..|..:||..|...|.|:.|....|
Yeast   133 YMNRYWVQKERSDGKRHIFDVNTLCLMTWKE--VMFDPSKDVLINELLDQVTLGREGQIIQRSNI 195

  Fly   343 KNACSMLITLGINSR-------TVYEEDFEKPFLAQSAAFYKFESQNFLAENNAGVYIKKVEARI 400
            ..|...|:.|||:.:       .||.:.||||||.::..:|...:.::|.:::...||.:....|
Yeast   196 STAIKSLVALGIDPQDLKKLNLNVYIQVFEKPFLKKTQEYYTQYTNDYLEKHSVTEYIFEAHEII 260

  Fly   401 TEESSRAALYLDKDTEPRIVRVVEEELIKKHMRPIVEMENSGVVYMIKNSKTEDLACTYKLFSR- 464
            ..|.....:|.|..|:..:...:.:.||..|   |.::||..|| ::.....|.:...|.|..| 
Yeast   261 KREEKAMTIYWDDHTKKPLSMALNKVLITDH---IEKLENEFVV-LLDARDIEKITSLYALIRRD 321

  Fly   465 --------------LKEEGLKVIADTMSAYLREQGRMLVKEEENGN-----------TNPITFVQ 504
                          :|:.|...|:..::.:...     :.:.||.|           .:|..:::
Yeast   322 FTLIPRMASVFENYVKKTGENEISSLLAMHKHN-----IMKNENANPKKLALMTAHSLSPKDYIK 381

  Fly   505 NLLDLKDRFDQFLVHSFANDRIFKNVISSDFEHFLNLN-------------NKSPEYLSLFIDDK 556
            .||::.|.|.:....||.:|......:.:....|:|:|             :|:.|.|:.:.|..
Yeast   382 KLLEVHDIFSKIFNESFPDDIPLAKALDNACGAFININEFALPAGSPKSATSKTSEMLAKYSDIL 446

  Fly   557 LKKGGK-----GMSEQEIESILDKTMVLFRFLLEKDVFERYYKTHLAKRLLLNKSVSDDFEKNMI 616
            |||..|     .||:::|       :.:|::|.:||.||.:|:...||||:...|.|.:.|:|:|
Yeast   447 LKKATKPEVASDMSDEDI-------ITIFKYLTDKDAFETHYRRLFAKRLIHGTSTSAEDEENII 504

  Fly   617 SKLKTECGCQFTSKLEGMFKDMSVSNTIMDEF----KNFVNNNNLSLGGVELTVRILTTGFWPTQ 677
            .:|:.....::|.|:..||:|:.:|..:.|:|    ||..:.:....  .:|...:|....||..
Yeast   505 QRLQAANSMEYTGKITKMFQDIRLSKILEDDFAVALKNEPDYSKAKY--PDLQPFVLAENMWPFS 567

  Fly   678 TATPNCNIPAAPREAFDIFKNFYLNKHSGRQLTLQPQMGTAYINAVFYGRKAVESEKDKDAPSSS 742
            .......:|.....:.:..|..|..||:||.|        .::..:..|....:..|....|.: 
Yeast   568 YQEVEFKLPKELVPSHEKLKESYSQKHNGRIL--------KWLWPLCRGELKADIGKPGRMPFN- 623

  Fly   743 SSGCGVPTTTRKHILQVSTYQMCVLLLFNNRDVLTYDDIHQETDIPERELVRAL------QSLSM 801
                          ..|:.:||.:|||:|:.||||.::|.:.|.:..:.:..|:      :.:..
Yeast   624 --------------FTVTLFQMAILLLYNDADVLTLENIQEGTSLTIQHIAAAMVPFIKFKLIQQ 674

  Fly   802 GKPAQRLLVRNSKTKTKDIEPTDEFYVNDAFNSKFHRVKIQTVAAKGESEPERKETRGKVDEDRK 866
            ..|....||: .:|:.|...|......|..|.|......:|:::..|......|....::.||.:
Yeast   675 VPPGLDALVK-PETQFKLSRPYKALKTNINFASGVKNDILQSLSGGGHDNHGNKLGNKRLTEDER 738

  Fly   867 HE----------IEAAIVRIMKARKRLAHNLLVSDVTSQLKSRFLPSPVFIKKRIEGLIEREYLQ 921
            .|          :||.|||||||::.|.|..||::..:|...||......:|:.|:.||::.|||
Yeast   739 IEKELNTERQIFLEACIVRIMKAKRNLPHTTLVNECIAQSHQRFNAKVSMVKRAIDSLIQKGYLQ 803

  Fly   922 RSPEDRKVYNYLA 934
            |. :|.:.|.|||
Yeast   804 RG-DDGESYAYLA 815

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul3NP_723909.2 Cullin 196..831 CDD:279260 162/736 (22%)
CULLIN 582..724 CDD:214545 38/145 (26%)
Cullin_Nedd8 866..926 CDD:287520 25/69 (36%)
CDC53NP_010150.1 COG5647 7..815 CDD:227934 199/856 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5647
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53685
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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