DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cul3 and AT1G59790

DIOPT Version :10

Sequence 1:NP_723909.2 Gene:Cul3 / 34896 FlyBaseID:FBgn0261268 Length:934 Species:Drosophila melanogaster
Sequence 2:NP_176188.1 Gene:AT1G59790 / 842272 AraportID:AT1G59790 Length:374 Species:Arabidopsis thaliana


Alignment Length:349 Identity:88/349 - (25%)
Similarity:179/349 - (51%) Gaps:19/349 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 WASLKNAIQE----IQKKNNSGLSFEQ---LYRNAYNMVLHK--HGNRLYYGLREVVSEHLEHKV 248
            |::::..|.:    ::.:......|.:   ||...|:|.:.:  :..:||...|:|:.::....|
plant    18 WSNIQKGITKLIRILEGEPEPTFYFSECFKLYTIIYDMCVQRSDYSQQLYEKYRKVIEDYTIQTV 82

  Fly   249 RADVLEALHSNFLPKLNQAWTDHQTSMVMIRDILMYMDRVYVQQRE--VDNVYNLGLILFRDQVV 311
            ...:.|....:.|.:|.:.|.:|:..:..:....:|:||..|::.:  :.::..:||..|.|.| 
plant    83 LPSLREKHDEDMLRELVKRWNNHKIMVKWLSKFFVYIDRHLVRRSKIPIPSLDEVGLTCFLDLV- 146

  Fly   312 RYSEIQKALREKLLGMVMEERHGEAINHLAIKNACSMLITLGINSRTVYEEDFEKPFLAQSAAFY 376
             |.|:|...:|.::.::.:||.||.|:...:||...:.:..|:.:...||||||...|..:|::|
plant   147 -YCEMQSTAKEVVIALIHKEREGEQIDRALVKNVLDIYVENGMGTLEKYEEDFESFMLQDTASYY 210

  Fly   377 KFESQNFLAENNAGVYIKKVEARITEESSRAALYLDKDTEPRIVRVVEEELIKKHMRPIVEMENS 441
            ..::..:..|::...|:.|||..:..|..|...||...|||::|..::.||:....:..:|.|:|
plant   211 SRKASRWTEEDSCPDYMIKVEECLKMERERVTHYLHSITEPKLVEKIQNELLVMVTKNRLENEHS 275

  Fly   442 GVVYMIKNSKTEDLACTYKLFSRLKEEGLKVIADTMSAYLREQGRMLVKEEENGNTNPITFVQNL 506
            |...::::.|..||:..|:|:..:.:. |..:||....::.|:|..|:|:.::..||     |.|
plant   276 GFSALLRDDKKNDLSRIYRLYLPIPKR-LGRVADLFKKHITEEGNALIKQADDKTTN-----QLL 334

  Fly   507 LDLKDRFDQFLVHSFANDRIFKNV 530
            ::|.::|..:::..|.|..:|..|
plant   335 IELHNKFIVYVIECFQNHTLFHKV 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul3NP_723909.2 Cullin 193..832 CDD:459983 88/349 (25%)
Cullin_Nedd8 864..926 CDD:463146
AT1G59790NP_176188.1 Cullin 18..>357 CDD:459983 87/346 (25%)
Blue background indicates that the domain is not in the aligned region.

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