DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cul3 and AT3G46910

DIOPT Version :10

Sequence 1:NP_723909.2 Gene:Cul3 / 34896 FlyBaseID:FBgn0261268 Length:934 Species:Drosophila melanogaster
Sequence 2:NP_190275.1 Gene:AT3G46910 / 823844 AraportID:AT3G46910 Length:247 Species:Arabidopsis thaliana


Alignment Length:233 Identity:50/233 - (21%)
Similarity:101/233 - (43%) Gaps:36/233 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 YVETIWASLKNAIQEIQKKNNSGLSFEQLYRNAYN--MVLHKHGNRLYYGLREVVSEHLEHKVRA 250
            |||..|..||.||:.|........:...|: ||.|  ......|..||    :::.|..|..:.|
plant    25 YVEDAWTMLKPAIRAIFLDEPQDFACSGLF-NAVNKSWCEKSSGEALY----KLILEECEIYISA 84

  Fly   251 DVLEALHSN-------FLPKLNQAWTDHQTSMVMIRDILMYMDRVYVQQREV---DNVYNLGLIL 305
             .:::|.|.       ||..|.:.|.|       .|..|.::..:...:.:.   .:|::||..|
plant    85 -AIQSLESQCDTDPSLFLSLLEKCWLD-------FRRKLQFLCSIAGGEGQTVGPHSVWDLGSEL 141

  Fly   306 FRDQVVRYSEIQKALREKLLGMVMEERHGEAINHLAIKNACSMLITLGIN----------SRTVY 360
            ....:....:::..|...:|.::.::|...:::...:||....::::.:.          .:::|
plant   142 SPKHLFSAQKVRDKLLSIILQLIRDQRSFMSVDMTQLKNTTRPVMSVHMTQLNNLRGLFYGQSLY 206

  Fly   361 EED-FEKPFLAQSAAFYKFESQNFLAENNAGVYIKKVE 397
            :.. |:|||:..:..||..|:..|..:::..:|:|:||
plant   207 KSPFFKKPFIDCAVEFYSAEAMQFKEQSDIPLYLKRVE 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul3NP_723909.2 Cullin 193..832 CDD:459983 47/228 (21%)
Cullin_Nedd8 864..926 CDD:463146
AT3G46910NP_190275.1 Cullin 30..>244 CDD:459983 45/226 (20%)
Blue background indicates that the domain is not in the aligned region.

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