DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cul3 and Cacul1

DIOPT Version :10

Sequence 1:NP_723909.2 Gene:Cul3 / 34896 FlyBaseID:FBgn0261268 Length:934 Species:Drosophila melanogaster
Sequence 2:NP_084473.1 Gene:Cacul1 / 78832 MGIID:1926082 Length:377 Species:Mus musculus


Alignment Length:294 Identity:59/294 - (20%)
Similarity:112/294 - (38%) Gaps:84/294 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 PLTPTPLSMP-------VPAPAAPAVVKTETSATTSGPSTSASASAESTEKRFKEIARKYPLWLP 173
            |:.|.||..|       ....||.||.|     |...|::|::.:..::..:|            
Mouse    83 PMGPPPLPEPNGVIMMLKSCDAAAAVAK-----TAPAPTSSSTININTSTSKF------------ 130

  Fly   174 EYKRRAFNASMDEKYVETIWASLKNAIQEIQKKNNSG---LSFEQLYRNAYNMVLHKHGNRLYYG 235
                 ..|....|.|..|.|..|..||.::..::...   :|:||:|...|..|..:|..::|..
Mouse   131 -----LMNVITIEDYKSTYWPKLDGAIDQLLTQSPGDYIPISYEQIYSCVYKCVCQQHSEQMYSD 190

  Fly   236 LREVVSEHLEHKVRADVLEALHSNFLPKLNQAWTDHQTSMVMIRDILMYMDRVYVQQREVDNVYN 300
            |.:.::.||| :|..::..:....::.:.|.|...:..::..|..:.:||::.|::         
Mouse   191 LIKKITSHLE-RVSKELQASPPDLYIERFNIALGQYMGALQSIVPLFIYMNKFYIE--------- 245

  Fly   301 LGLILFRDQVVRYSEIQKALREKLLGMVMEERHGEAINHLAIKNACSMLITLGINSRTVYEEDFE 365
                         :::.:.|::.|:.:..|        |:|.|:..|::                
Mouse   246 -------------TKLNRDLKDDLIKLFTE--------HVAEKHIYSLM---------------- 273

  Fly   366 KPFL--AQSAAFYKFESQNFLAENNAGVYIKKVE 397
             |.|  |||..|....|.  :|....|:|..:.|
Mouse   274 -PLLLEAQSTPFQVTPST--MANIVKGLYTLRPE 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul3NP_723909.2 Cullin 193..832 CDD:459983 41/210 (20%)
Cullin_Nedd8 864..926 CDD:463146
Cacul1NP_084473.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..63
Cullin 145..>269 CDD:459983 29/154 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 347..377
Blue background indicates that the domain is not in the aligned region.

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