DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cul3 and Cul2

DIOPT Version :10

Sequence 1:NP_723909.2 Gene:Cul3 / 34896 FlyBaseID:FBgn0261268 Length:934 Species:Drosophila melanogaster
Sequence 2:NP_083678.2 Gene:Cul2 / 71745 MGIID:1918995 Length:745 Species:Mus musculus


Alignment Length:746 Identity:217/746 - (29%)
Similarity:367/746 - (49%) Gaps:94/746 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 GNRLYYGLREVVSEHLEHKVRADVLEALHSNFLPKLNQAWTDHQTSMVMIRDILMYMDRVYVQQR 293
            |.|||...:..:..|:.|..:. |||: ....|...::.|.::......:..:..|::..|:::.
Mouse    54 GERLYAETKIFLESHVRHLYKR-VLES-EEQVLVMYHRYWEEYSKGADYMDCLYRYLNTQYIKKN 116

  Fly   294 ---EVDNVYNLGLILFRDQVVRYSE-------------IQKALREKLLGMVMEERHGEAINHLAI 342
               |.|..|..|.:...:.::...|             :|..|...||..:..:|.||..|...|
Mouse   117 KLTEADIQYGYGGVDMNEPLMEIGELALDMWRKLMVEPLQNILIRMLLREIKNDRGGEDPNQKVI 181

  Fly   343 KNACSMLITLGINSRTVYEEDFEK-------------PFLAQSAAFYKFESQNFLAENNAGVYIK 394
            .         |:.:..|:.|.::|             |||.::..:||.|:.|.|.|:|...|::
Mouse   182 H---------GVINSFVHVEQYKKKFPLKFYQGIFVSPFLTETGEYYKQEASNLLQESNCSQYME 237

  Fly   395 KVEARITEESSRAALYLDKDTEPRIVRVVEEELIKKHMRPIVEMENSGVVYMIKNSKTEDLACTY 459
            ||..|:.:|..|...||...:..:::...::.::..|:    :..:|....:|:..:..|:|..|
Mouse   238 KVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADHL----QFLHSECHSIIQQERKNDMANMY 298

  Fly   460 KLFSRLKEEGLKVIADTMSAYLREQG----RMLVKEEENGNTNPITFVQNLLDLKDRFDQFLVHS 520
            .|. |....||..:.:.:..::.::|    ..|.:|.     .|..||:::|::..:|.|.:...
Mouse   299 VLL-RAVSSGLPHMIEELQKHIHDEGLRATSNLTQEH-----MPTLFVESVLEVHGKFVQLINTV 357

  Fly   521 FANDRIFKNVISSDFEHFLNLNN-----KSPEYLSLFIDDKLKKGGKGMSEQEIESILDKTMVLF 580
            ...|:.|.:.:.......:|...     |:||.|:.:.|:.|||..|||:|.|:|..|...:.:|
Mouse   358 LNGDQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKSAKGMTENEVEDKLTSFITVF 422

  Fly   581 RFLLEKDVFERYYKTHLAKRLLLNKSVSDDFEKNMISKLKTECGCQFTSKLEGMFKDMSVSNTIM 645
            :::.:||||:::|...|||||:...|:|.|.|:.||:|||..||.:|||||..|:.|||||..:.
Mouse   423 KYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLN 487

  Fly   646 DEFKNFVNNNNLSLG-GVELTVRILTTGFWP-TQTATPNCNIPAAPREAFDIFKNFYLNKHSGRQ 708
            ::|.||:.|.:..:. |:...:.:|..|.|| ||..:....||....::..:|:.||....|||:
Mouse   488 NKFNNFIRNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRK 552

  Fly   709 LTLQPQMGTAYINAVFYGRKAVESEKDKDAPSSSSSGCGVPTTTRKHILQVSTYQMCVLLLFNNR 773
            ||....:.|..:...:.|                          :.::..|:||||.|||.|||.
Mouse   553 LTWLHYLCTGEVKMNYLG--------------------------KPYVAMVTTYQMAVLLAFNNS 591

  Fly   774 DVLTYDDIHQETDIPERELVRALQSLSMGKPAQRLLVRNSKTKTKDIEPTDEFYVNDAFNSKFHR 838
            :.::|.::...|.:.|:||.:.::||...|      :.|..::.:||:....|.:|.:|:||..:
Mouse   592 ETVSYKELQDSTQMNEKELTKTIKSLLDVK------MINHDSEKEDIDAESSFSLNMSFSSKRTK 650

  Fly   839 VKIQTVAAKGESEPERKETRGKVDEDRKHEIEAAIVRIMKARKRLAHNLLVSDVTSQLKSRFLPS 903
            .||.|...| ::..|.::||..||||||..::|||||||||||.|.||.|:.:|.||.::||.||
Mouse   651 FKITTSMQK-DTPQELEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPS 714

  Fly   904 PVFIKKRIEGLIEREYLQRSPEDRKVYNYLA 934
            ...|||.||.||:::|::||......|:|:|
Mouse   715 ISMIKKCIEVLIDKQYIERSQASADEYSYVA 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul3NP_723909.2 Cullin 193..832 CDD:459983 166/642 (26%)
Cullin_Nedd8 864..926 CDD:463146 35/61 (57%)
Cul2NP_083678.2 Cullin 14..644 CDD:459983 166/642 (26%)
Cullin_Nedd8 675..735 CDD:463146 34/59 (58%)

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