DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dao and smyd3

DIOPT Version :9

Sequence 1:NP_001260462.1 Gene:dao / 34891 FlyBaseID:FBgn0028862 Length:882 Species:Drosophila melanogaster
Sequence 2:NP_001032477.1 Gene:smyd3 / 569507 ZFINID:ZDB-GENE-051120-138 Length:380 Species:Danio rerio


Alignment Length:345 Identity:63/345 - (18%)
Similarity:98/345 - (28%) Gaps:139/345 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 EVLKVERFEMAVQTGDDLDINDSKAFEIAWLDNSSSLHTTRAVAKNALIFESEAVAMVPSGNCRV 354
            |.:.:|||           |::.|         .:.|...|.:....:|:..|..|         
Zfish     2 EAVIMERF-----------ISEGK---------GNGLRALREIKPGEVIYSCEPFA--------- 37

  Fly   355 CDYCGITQFIPFPCIYCSNR-----------LVVYCSRQCRFKHAAIHAVECFGHQIELFESFGE 408
              :|....|:...|..|..|           ...||:.||:.:....|..||             
Zfish    38 --FCVARDFLKTACQSCLKRGESLSRCSQCKTARYCNVQCQKQAWPDHKREC------------- 87

  Fly   409 VFGMPRLLQLAFRMLITGLPELLGHCRKKPTLSKLWSAINGGLQERQDIAYSAVLRLERLKEERP 473
                                    .|                              |:.|:...|
Zfish    88 ------------------------KC------------------------------LKHLQPRIP 98

  Fly   474 TDTVIALALAAHILSIYLSKCTTFFDQLEKSLPTASRMSSAEWELLCAALLMRHIGQLRHRSLTA 538
            ||:|   .|.|.|:...||:..:..::|         .|.||.:...|.:.......|:|...|.
Zfish    99 TDSV---RLVARIIFKLLSQSESDQEEL---------YSIAEHQSHLADMSEEKTEGLKHLCTTL 151

  Fly   539 --------CRSFVLPADPHVFSPLNEFQLWAAPMRLQEGHLHLLAGEVAVVSYSVYPDTLNLCRH 595
                    |....||      |.|:...|.|   |:......:..||:..|...:|| :::|..|
Zfish   152 QVYLAEENCDLSRLP------SGLDPVSLLA---RVTCNCFSISDGELQDVGVGLYP-SMSLLNH 206

  Fly   596 SCSSTICAKFSGRTVTALAL 615
            .|.......|.|:.:|..|:
Zfish   207 DCQPNCIMMFEGKRLTLRAV 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
daoNP_001260462.1 TPR_11 165..235 CDD:290150
TPR repeat 200..235 CDD:276809
TPR repeat 243..270 CDD:276809
zf-MYND 355..395 CDD:280009 10/50 (20%)
smyd3NP_001032477.1 zf-MYND 49..87 CDD:280009 8/37 (22%)
SET <201..239 CDD:279228 7/26 (27%)
TPR_12 276..351 CDD:290160
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582760
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.