DRSC/TRiP Functional Genomics Resources

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Protein Alignment dao and smyd3

DIOPT Version :10

Sequence 1:NP_609742.1 Gene:dao / 34891 FlyBaseID:FBgn0028862 Length:882 Species:Drosophila melanogaster
Sequence 2:XP_073783521.1 Gene:smyd3 / 569507 ZFINID:ZDB-GENE-051120-138 Length:483 Species:Danio rerio


Alignment Length:604 Identity:111/604 - (18%)
Similarity:169/604 - (27%) Gaps:260/604 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 EVLKVERFEMAVQTGDDLDINDSKAFEIAWLDNSSSLHTTRAVAKNALIFESEAVAMVPSGNCRV 354
            |.:.:|||           |::.|         .:.|...|.:....:|:           :|:.
Zfish     3 EAVIMERF-----------ISEGK---------GNGLRALREIKPGEVIY-----------SCKP 36

  Fly   355 CDYCGITQFIPFPCIYCSNR-----------LVVYCSRQCRFKHAAIHAVECFGHQIELFESFGE 408
            ..:|....|:...|..|..|           ...|||.||:.:....|..||             
Zfish    37 FAFCVARDFLKTACQSCLKRGESLSRCSQCKTARYCSVQCQKQAWPDHKREC------------- 88

  Fly   409 VFGMPRLLQLAFRMLITGLPELLGHCRKKPTLSKLWSAINGGLQERQDIAYSAVLRLERLKEERP 473
                                    .|                              |:.|:...|
Zfish    89 ------------------------KC------------------------------LKHLQPRIP 99

  Fly   474 TDTVIALALAAHILSIYLSKCTTFFDQL------EKSLPTASRMSSAEWELLCAALLMRHIGQLR 532
            ||:|   .|.|.|:...||:..:..::|      :..|...|.......:.||..|.:       
Zfish   100 TDSV---RLVARIIFKLLSQSESDQEELYSIAEHQSHLADMSEEKKEGLKHLCTTLQV------- 154

  Fly   533 HRSLTACRSFVLPADPHVFSPLNEFQLWAAPMRLQEGHLHLLAGEVAVVSYSVYPDTLNLCRHSC 597
            :.:...|....||      |.|:...|.|   |:......:..||:..|...:||       .:.
Zfish   155 YLAEENCDLSRLP------SGLDPVSLLA---RVTCNCFSISDGELQDVGVGLYP-------RNM 203

  Fly   598 SSTI-------CAKFS-GRTVTALALLDLPAGSGIYNCFAGGNFQQLPREERTKQLLE----SGI 650
            .|||       |...| ||....|....|...:||                 .::|||    :|:
Zfish   204 FSTIMLQDRAECVSLSPGRGWLCLTAQILHTSTGI-----------------NRKLLENKSYAGV 251

  Fly   651 RCHCNACQLTHSDDQFHKFHRYRCDNPNCMEIFTPNALP--------------------HAPS-- 693
            ..|  ...|.:.|.|           |||:.:|....|.                    .|||  
Zfish   252 TMH--GMSLLNHDCQ-----------PNCIMMFEGKRLTLRAVRVIRSAEELTISYTDILAPSKD 303

  Fly   694 LRWWLSEEYTQPEFNGADLIMCPHCGEYQKLEWFWAFTTSLIDCELIEERCKLYAAIERAENQLM 758
            .|..|.|:|   .|.    ..|..|....|            |||::......:.:|:.:.:.|.
Zfish   304 RRSQLQEQY---HFR----CECKRCSTEDK------------DCEMLSGEKSAWTSIKDSIHHLE 349

  Fly   759 DLHECKVALARLLLEQCLMVHREGATV--------------------LDDWEFNKLGSILRSVLP 803
            .| :.:.....||.|...::||....|                    |||:|             
Zfish   350 QL-QSEQHWDELLKESQALLHRHSDVVPDRNIYMLRLLDLAMDACISLDDYE------------- 400

  Fly   804 SVMAQYGGQSI-EYVKYFS 821
             ...:||.::: .|..|||
Zfish   401 -TALEYGNRALGPYKLYFS 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
daoNP_609742.1 TPR repeat 200..235 CDD:276809
TPR repeat 243..270 CDD:276809
SET <459..657 CDD:394802 46/215 (21%)
smyd3XP_073783521.1 None
Blue background indicates that the domain is not in the aligned region.

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