DRSC/TRiP Functional Genomics Resources

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Protein Alignment dao and Smyd5

DIOPT Version :9

Sequence 1:NP_001260462.1 Gene:dao / 34891 FlyBaseID:FBgn0028862 Length:882 Species:Drosophila melanogaster
Sequence 2:NP_650955.1 Gene:Smyd5 / 42517 FlyBaseID:FBgn0038869 Length:393 Species:Drosophila melanogaster


Alignment Length:416 Identity:89/416 - (21%)
Similarity:134/416 - (32%) Gaps:117/416 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   315 FEIAWLDNSS-SLHTTRAVAKNALIFESEA-VAMVPSGNC----RVCDYC--------------- 358
            |||..|.... ::..|:..||:.:|||.|. |:...|.|.    ..||:|               
  Fly     4 FEIRELPGKGRAMIATKNFAKDEVIFEEEPFVSRQFSWNVAYGYAACDHCMRPLETVLENVRRLA 68

  Fly   359 -----------------GITQFIPFPCIYCSNRLVVYCSRQCRFK-HAAIHAVECFG-------H 398
                             .:.||.  .|..|..|   |||..|..: ....|.|.|.|       |
  Fly    69 SDPKVEVPLLQHDPTAQWVAQFT--QCPRCKVR---YCSEDCLMEAQKRYHRVACMGAFHSDDTH 128

  Fly   399 QIE-LFESFGEVFGMPRLLQLAFRMLITGLPELLGHCRKKPTLSKLWSAINGGLQERQDIAYSAV 462
            .|. |.|::.::...|....:   |||..|..|.....||....:...:....:..|:...|..:
  Fly   129 PINVLNETWKKMHYPPETGSI---MLIVRLMALYQQSTKKEEFLEQLQSFQSLIVNREQKIYHKM 190

  Fly   463 L--RLERLKEERPTDTVIALALAAHILSIYLSKCTTF-------------FDQLEKSLPTASRMS 512
            |  ..|:..|:                 :||:.|..|             |..|...|.|.|   
  Fly   191 LGENFEQQMEQ-----------------LYLAFCNAFTGEEFSIFKTPDAFKTLMAILGTNS--- 235

  Fly   513 SAEWELLCAALLMRHIGQLRHRSLTACRSFVL-PADPHVFSPLNEFQLWAAPMRLQEGH-LHLLA 575
                :.:..::|.:.:.::....||......| .....:::.:.||   |......||. |:||.
  Fly   236 ----QGIATSVLSQWVAKVSDLPLTDSEKEQLDTVIDGLYAKVGEF---AGEFLNNEGSGLYLLQ 293

  Fly   576 GEVAVVSYSVYPDTLNLCRHSCSSTICAKF--SGRTVTALALLDLPAGSGIYNCFAGGNFQQLPR 638
            .::               .|||....|:.|  |...|...||..:..|..|...:......:..|
  Fly   294 SKI---------------NHSCVPNACSTFPYSNDIVVLKALAPIQQGEEICISYLDECMLERSR 343

  Fly   639 EERTKQLLESGI-RCHCNACQLTHSD 663
            ..|.|.|.|:.: .|.|..|:...||
  Fly   344 HSRHKVLRENYVFICQCPKCRAQASD 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
daoNP_001260462.1 TPR_11 165..235 CDD:290150
TPR repeat 200..235 CDD:276809
TPR repeat 243..270 CDD:276809
zf-MYND 355..395 CDD:280009 14/72 (19%)
Smyd5NP_650955.1 zf-MYND 87..118 CDD:280009 11/35 (31%)
SET <296..333 CDD:279228 11/51 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452054
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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