DRSC/TRiP Functional Genomics Resources

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Protein Alignment dao and CG18213

DIOPT Version :9

Sequence 1:NP_001260462.1 Gene:dao / 34891 FlyBaseID:FBgn0028862 Length:882 Species:Drosophila melanogaster
Sequence 2:NP_650589.2 Gene:CG18213 / 42055 FlyBaseID:FBgn0038470 Length:879 Species:Drosophila melanogaster


Alignment Length:635 Identity:117/635 - (18%)
Similarity:200/635 - (31%) Gaps:219/635 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 LYAESYDDCLCALDLGYPEEYLPLIKLRQAA---------CALKLRNF----------------- 259
            ||.::..:.....||.|.|...|.:|..:..         |....|.:                 
  Fly   106 LYIKNNQNTTACNDLLYYESLDPALKTAEGTIISQILHCICLFVNREYEASKDKLSVVKGLIEDG 170

  Fly   260 ------------ALCEEHLHELLHIELNQVFEARTHELWHQCEVLKVERF------------EMA 300
                        ||.|:|...:....:|..|          |:.::.|.|            ..|
  Fly   171 TLADRSEVSPFLALIEQHEERINQARINVEF----------CKKVQTENFVPFKGFKLTRKIPFA 225

  Fly   301 VQTGDDLDINDSKAFEIAWLDNSSSLHTTRAVAKNALIFESEAVAMVPSGNCRVCDYCGITQFIP 365
            .|..|         :....::.|..:..:..|.|..::.....|....|.....|:.||:.|...
  Fly   226 SQACD---------YSEKSIEKSGGVFASCDVPKGEIVLVENPVYFQFSAPFLNCELCGVHQQQL 281

  Fly   366 FPCIYCSNRLVVYCSRQCRFKHAAIHAVECFGHQIELFESFGEVFGMPRL-LQLAFRMLITG--- 426
            :.|..|..|  .|||:.|....|.:|..||:|::|.|         :|.| ..:.||:....   
  Fly   282 YTCDNCRYR--SYCSKSCMKSDAEVHQYECYGYKIGL---------IPMLEANMLFRLFCEAGEY 335

  Fly   427 -LPELLGHCRKKPTLSKLWSAINGGLQERQDIAYSAVLRLERLKEERPTDTVIALALAA----HI 486
             ||.::.:            |::||:......|::.:  ||..:||..|..::...||.    ::
  Fly   336 ILPAIVDY------------AMDGGILSNPRDAWTFI--LEHAQEEEKTYNLVGELLATAPDYNL 386

  Fly   487 LS--IYLSKCTTFFDQLEKSLPTASRMSSAEWELLC----------AALLMRHIGQL-------- 531
            |:  .|....||.| :|...:...:|::...:.||.          ||:|:|..|.:        
  Fly   387 LTREKYTEIVTTAF-RLSVFIYNDTRLAEKYFYLLALVKTDLITVMAAILLRLGGHVLLNSQRDN 450

  Fly   532 ---RHR-----------SLTACRSFVLPAD---PHVFS-----PLNEF-----QLWAAPMRLQEG 569
               |.|           ....|....:|.|   .:|||     .:.:|     .:..:...::..
  Fly   451 LCYRQREGIDAMNENNDEFENCGILPMPTDRISANVFSYYGVNAITDFVDCYNNVHDSLAEIEPE 515

  Fly   570 HLHLLAGEVAVVSYSVYPDTLNLCRHSCSSTIC-AKFSGRTVTALALLDLPAGSGIYNCFAGGNF 633
            :....:.:..:..::   |.|    ||    || .|:....|..|...|                
  Fly   516 YPEKFSNDSPIFRFA---DRL----HS----ICMQKYEIEAVEDLVSAD---------------- 553

  Fly   634 QQLPREERTK--QLLESGIRCHCNACQLTHSDDQFHKF-HRY----------------------- 672
             .||.:|..:  |:..:..||..    ||:....|.:| ::|                       
  Fly   554 -TLPEQEINEILQIFNTSQRCQL----LTNIAKYFQQFVYQYFHKIENTVQLKSTLCVTLKAFKQ 613

  Fly   673 RCDNPNCMEIFTPNALPHAPSLRWWLSEEYTQPEFNGADLIMCPHCGEYQ 722
            .|...|...||.||......:         .:....|.:|::||....|:
  Fly   614 NCGTKNIKAIFLPNGKVVGVT---------AKKVHKGEELVICPDFARYR 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
daoNP_001260462.1 TPR_11 165..235 CDD:290150 2/13 (15%)
TPR repeat 200..235 CDD:276809 2/13 (15%)
TPR repeat 243..270 CDD:276809 8/64 (13%)
zf-MYND 355..395 CDD:280009 13/39 (33%)
CG18213NP_650589.2 zf-MYND 271..309 CDD:280009 13/39 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45473058
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR46165
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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