DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dao and SmydA-6

DIOPT Version :10

Sequence 1:NP_609742.1 Gene:dao / 34891 FlyBaseID:FBgn0028862 Length:882 Species:Drosophila melanogaster
Sequence 2:NP_611182.1 Gene:SmydA-6 / 36917 FlyBaseID:FBgn0034183 Length:498 Species:Drosophila melanogaster


Alignment Length:541 Identity:107/541 - (19%)
Similarity:177/541 - (32%) Gaps:198/541 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   299 MAVQTGD-----DLDINDSKA-FEIAWLDNSSSLHTTRAVAKNALIFESEAVAMVPSGNCRVCDY 357
            ||..|.|     ::..||:.. |.:|       |...|  |...|:.|:..|.:...|..|    
  Fly     1 MAAVTDDFARKCEIKQNDTLGRFAVA-------LCNVR--AGETLLLENPIVVLPLMGERR---- 52

  Fly   358 CGITQFIPFPCIYCSNRLVVYCSRQCRFKHAAIHAVECFGHQIELFESFGEVFGMPRLLQLAFRM 422
                      |..|.|....:| |:||.  .|: ..:|..|         :.....||.::.|. 
  Fly    53 ----------CSKCFNLTESFC-RKCRL--LAL-CEDCSDH---------DERDCKRLAEMNFS- 93

  Fly   423 LITGLPELLGHCRKKPTLSKLWSAINGGLQERQDIAYSAVLRLERLKEERPTDTVIALALAAHIL 487
              ....||                    ||:::......||:...|:|.                
  Fly    94 --DDQVEL--------------------LQKKEHTEIQPVLKCLLLREH---------------- 120

  Fly   488 SIYLSKCTTFFDQLEKSLPTASRMSSAEWELLCAALLMRHIGQLRHRSLTACRSFVLPADPHVFS 552
                          |::||....||..:.:|            :..|.....:::    ..|.|:
  Fly   121 --------------EETLPLYEEMSQMDSQL------------MTRRGTEVWKNY----QEHAFT 155

  Fly   553 PLNE----FQL-WAAPMRLQEGHLHLL--------AGEVAVVSYSVYPDTLNLCRHSCSSTICAK 604
            ||:.    .|| .||...|.:|.|.:|        |.||......:| ....|..|||:..:...
  Fly   156 PLDYGGVLAQLRGAADEDLVQGLLGILDINAYEIRAPEVGGAMRGLY-RRAGLFAHSCTPNLVIS 219

  Fly   605 FSG-RTVTALALLDLPAGSGIYNCFAGGNFQQLPREERTKQLLESG--IRCHCNACQ-----LTH 661
            ... :.:...|...:.||..:|||:..   ..|..|||.| :|:.|  ..|.|..||     .||
  Fly   220 IDDEQRIKVYANRFIAAGEILYNCYTN---VLLGTEERRK-ILKVGKCFDCSCPRCQDPTELGTH 280

  Fly   662 SDDQFHKFHRYRCDNPNCMEIFTPNALPHAPSLRWW---LSEEYTQPEFNGADLIMCPHCGEYQK 723
            ...       :.|...:|::.:    :...|....|   |:.|:|..:                 
  Fly   281 MSS-------FICSQCSCVDGY----IVRQPDTGIWQCLLNPEHTLKQ----------------- 317

  Fly   724 LEWFWAFTTSLIDCELIEERCKLYAAIERAENQLM----DLHECKVALARLLLEQCLMVHREGAT 784
                 .|.:::               :|||:.::.    |::..::.||:|    ..::||....
  Fly   318 -----EFVSNM---------------LERAKEEIFHARDDIYRQELLLAKL----SRLLHRNHFL 358

  Fly   785 VLDDWEFNKLGSILRSVLPSV 805
            :||..:  .:.||||.:|.::
  Fly   359 MLDLKQ--NIASILRQILQNM 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
daoNP_609742.1 TPR repeat 200..235 CDD:276809
TPR repeat 243..270 CDD:276809
SET <459..657 CDD:394802 46/213 (22%)
SmydA-6NP_611182.1 SET_SMYD <185..271 CDD:380997 23/90 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.