DRSC/TRiP Functional Genomics Resources

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Protein Alignment dao and Smyd4-1

DIOPT Version :10

Sequence 1:NP_609742.1 Gene:dao / 34891 FlyBaseID:FBgn0028862 Length:882 Species:Drosophila melanogaster
Sequence 2:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster


Alignment Length:747 Identity:233/747 - (31%)
Similarity:353/747 - (47%) Gaps:62/747 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 FRPHVLKWFQHLRHQTGHFKSEEESRRLREAGNDSYRK------ERHPLKASDLFTEAIFLAPAR 200
            |:...|...|.|..........|.|:.|||.||..:::      :...|||..|::||:|  .|.
  Fly    42 FQKLALDLLQDLEQPVDRKGCAERSKNLREEGNLMFKESASGSSKDSVLKACRLYSEAVF--EAE 104

  Fly   201 NTL-AAALAHANRSLVLFDCGLYAESYDDCLCALDLGYPEEYLPLIKLRQAACALKLRNFALCEE 264
            |.: ..:||.|||.:.|.:.|.|.|:||||..||:.||||.....:.:|||.||.||:..|..||
  Fly   105 NAVEELSLAFANRGIALQEYGYYREAYDDCSNALECGYPERLRHKVIMRQAFCAWKLKKIASLEE 169

  Fly   265 HLHELLHIELNQVFEARTHELWHQCEVLKVERFEMAVQ-------TGDDL-DINDSKAFEIAWLD 321
            ||..|..::|.:.||.:..:|..:.|:||.:..|...|       .|:.| |......:.:|   
  Fly   170 HLDYLGQLQLKESFEQQLEDLKQKLELLKNQPREQETQGKVVDKSLGEILTDPGPRGRYMVA--- 231

  Fly   322 NSSSLHTTRAVAKNALIFESEAVAMVPSGNCRVCDYCGIT-QFIPFPCIYCSNRLVVYCSRQCRF 385
                   ..|::|..:||...|...||.....:|..|..| ...|.||..|..| ||||||:||.
  Fly   232 -------KEAISKGNVIFSERASCFVPLEQLLICQQCAATLMSAPIPCPNCHQR-VVYCSRKCRE 288

  Fly   386 KHAAIHAVECFGHQIELFESFGEVFGMPRLLQLAFRMLITGLPELLGHCRKKPTLSKLWSAINGG 450
            .|:|||..||..::.::....|       :..||.|:|:|.:|.:..|.::..:...:|..|. .
  Fly   289 AHSAIHKFECAAYRKDILRLLG-------ISHLALRLLLTYIPYIRPHLQEMTSAKGMWEEIM-N 345

  Fly   451 LQERQDIAYSAVLRLERLKEERPTDTVIALALAAHI-----LSIYLSKCTTFFDQLEKSLPTASR 510
            |..:.:.:.:|...|..|:.....|..|...|..||     |.:||.:.|.|:||.. |||.   
  Fly   346 LSRKPEESENAPEYLRSLRMVSQLDQAIDEELNYHILCANLLQLYLKEHTDFYDQFH-SLPA--- 406

  Fly   511 MSSAEWELLCAALLMRHIGQLRHRSLTACRSFVLPADPHVFSPLNEFQLWAAPMRLQEGHLHLLA 575
             |..:|:|:.:||::|..|||............:..:|..|..|.. :||..|..|:.|.||.|:
  Fly   407 -SIEDWQLIISALILRFAGQLLANGHVGDALLGVGMEPKEFVMLQP-ELWQKPRHLKRGQLHNLS 469

  Fly   576 GEVAVVSYSVYPDTLNLCRHSCSSTICAKFSGRTVTALALLDLPAGSGIYNCFAGG--NFQQLPR 638
            ....:.:.::  ..|:||.|:|..:|..||.|.:|...|..|:..|..|:||:...  |..:|.|
  Fly   470 HSDPITAINL--PYLSLCNHACEPSIRTKFDGCSVVNYAAKDILEGEEIFNCYTMDYRNSLKLQR 532

  Fly   639 EERTKQLLESGIRCHCNACQLTHSDDQFHKFHRYRCDNPNCMEIFTPNALPHAPSLRWWLSEEYT 703
            ....|.:.:  ..|.|..|..|..|..:..||||||:.|||.:.|.|:|.....:|||||.....
  Fly   533 SHPLKAIYK--FECTCAKCTRTDPDQNYLSFHRYRCEKPNCRQEFLPDAKVQQNNLRWWLRCNAE 595

  Fly   704 QPEFNGADLIMCPHCGEYQKLEWFWAFTTSLIDCELIEERCKLYAAIERAENQLMDLHECKVALA 768
            :|       |.|..|.|.|...|:..|...:.......:|..|:.|.:..:..|:|.|..|..:|
  Fly   596 KP-------ITCTVCHELQHFAWYNEFLGLIGSSADSSKRQALFKAFDDLDKWLVDHHSLKRIMA 653

  Fly   769 RLLLEQCLMVHREGATVLDDWEFNKLGSILRSVLPSVMAQYGGQSIEYVKYFSYFWDVMALSNYK 833
            ..|:..| ....:|.|.||::|:..|..|:|..|..:.||.|..|.||:...:|.||::|....:
  Fly   654 EELVTAC-FYEIDGGTSLDEFEYEDLARIIRKQLEGIAAQCGDNSTEYIARMTYLWDIIAQKKCR 717

  Fly   834 CNDRELMQMLNALEFIADEFKDIFINYYEDYI 865
            .:.:||::|...::::|.|.:::|:|||.|:|
  Fly   718 TDRKELLEMKGKVDYLASEHREVFLNYYNDFI 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
daoNP_609742.1 TPR repeat 200..235 CDD:276809 16/35 (46%)
TPR repeat 243..270 CDD:276809 12/26 (46%)
SET <459..657 CDD:394802 60/204 (29%)
Smyd4-1NP_610500.2 SET 217..>252 CDD:394802 9/44 (20%)
zf-MYND 258..298 CDD:460312 20/40 (50%)
SET <359..549 CDD:394802 59/199 (30%)

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