DRSC/TRiP Functional Genomics Resources

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Protein Alignment dao and Smyd4-1

DIOPT Version :9

Sequence 1:NP_001260462.1 Gene:dao / 34891 FlyBaseID:FBgn0028862 Length:882 Species:Drosophila melanogaster
Sequence 2:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster


Alignment Length:759 Identity:236/759 - (31%)
Similarity:355/759 - (46%) Gaps:86/759 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 FRPHVLKWFQHLRHQTGHFKSEEESRRLREAGNDSYRK------ERHPLKASDLFTEAIFLAPAR 200
            |:...|...|.|..........|.|:.|||.||..:::      :...|||..|::||:|  .|.
  Fly    42 FQKLALDLLQDLEQPVDRKGCAERSKNLREEGNLMFKESASGSSKDSVLKACRLYSEAVF--EAE 104

  Fly   201 NTL-AAALAHANRSLVLFDCGLYAESYDDCLCALDLGYPEEYLPLIKLRQAACALKLRNFALCEE 264
            |.: ..:||.|||.:.|.:.|.|.|:||||..||:.||||.....:.:|||.||.||:..|..||
  Fly   105 NAVEELSLAFANRGIALQEYGYYREAYDDCSNALECGYPERLRHKVIMRQAFCAWKLKKIASLEE 169

  Fly   265 HLHELLHIELNQVFEARTHELWHQCEVLKVERFEMAVQ-------TGDDL-DINDSKAFEIAWLD 321
            ||..|..::|.:.||.:..:|..:.|:||.:..|...|       .|:.| |......:.:|   
  Fly   170 HLDYLGQLQLKESFEQQLEDLKQKLELLKNQPREQETQGKVVDKSLGEILTDPGPRGRYMVA--- 231

  Fly   322 NSSSLHTTRAVAKNALIFESEAVAMVPSGNCRVCDYCGIT-QFIPFPCIYCSNRLVVYCSRQCRF 385
                   ..|::|..:||...|...||.....:|..|..| ...|.||..|..| ||||||:||.
  Fly   232 -------KEAISKGNVIFSERASCFVPLEQLLICQQCAATLMSAPIPCPNCHQR-VVYCSRKCRE 288

  Fly   386 KHAAIHAVECFGHQIELFESFGEVFGMPRLLQLAFRMLITGLPELLGHCRKKPTLSKLWSAINGG 450
            .|:|||..||..::.::....|       :..||.|:|:|.:|.:..|.::..:...:|..|. .
  Fly   289 AHSAIHKFECAAYRKDILRLLG-------ISHLALRLLLTYIPYIRPHLQEMTSAKGMWEEIM-N 345

  Fly   451 LQERQDIAYSAVLRLERLKEERPTDTVIALALAAHI-----LSIYLSKCTTFFDQLEKSLPTASR 510
            |..:.:.:.:|...|..|:.....|..|...|..||     |.:||.:.|.|:||.. |||.   
  Fly   346 LSRKPEESENAPEYLRSLRMVSQLDQAIDEELNYHILCANLLQLYLKEHTDFYDQFH-SLPA--- 406

  Fly   511 MSSAEWELLCAALLMRHIGQLRHRSLTACRSFVLPADPHVFSPL-------NEF-----QLWAAP 563
             |..:|:|:.:||::|..|||.             |:.||...|       .||     :||..|
  Fly   407 -SIEDWQLIISALILRFAGQLL-------------ANGHVGDALLGVGMEPKEFVMLQPELWQKP 457

  Fly   564 MRLQEGHLHLLAGEVAVVSYSVYPDTLNLCRHSCSSTICAKFSGRTVTALALLDLPAGSGIYNCF 628
            ..|:.|.||.|:....:.:.::  ..|:||.|:|..:|..||.|.:|...|..|:..|..|:||:
  Fly   458 RHLKRGQLHNLSHSDPITAINL--PYLSLCNHACEPSIRTKFDGCSVVNYAAKDILEGEEIFNCY 520

  Fly   629 AGG--NFQQLPREERTKQLLESGIRCHCNACQLTHSDDQFHKFHRYRCDNPNCMEIFTPNALPHA 691
            ...  |..:|.|....|.:.:  ..|.|..|..|..|..:..||||||:.|||.:.|.|:|....
  Fly   521 TMDYRNSLKLQRSHPLKAIYK--FECTCAKCTRTDPDQNYLSFHRYRCEKPNCRQEFLPDAKVQQ 583

  Fly   692 PSLRWWLSEEYTQPEFNGADLIMCPHCGEYQKLEWFWAFTTSLIDCELIEERCKLYAAIERAENQ 756
            .:|||||.....:|       |.|..|.|.|...|:..|...:.......:|..|:.|.:..:..
  Fly   584 NNLRWWLRCNAEKP-------ITCTVCHELQHFAWYNEFLGLIGSSADSSKRQALFKAFDDLDKW 641

  Fly   757 LMDLHECKVALARLLLEQCLMVHREGATVLDDWEFNKLGSILRSVLPSVMAQYGGQSIEYVKYFS 821
            |:|.|..|..:|..|:..| ....:|.|.||::|:..|..|:|..|..:.||.|..|.||:...:
  Fly   642 LVDHHSLKRIMAEELVTAC-FYEIDGGTSLDEFEYEDLARIIRKQLEGIAAQCGDNSTEYIARMT 705

  Fly   822 YFWDVMALSNYKCNDRELMQMLNALEFIADEFKDIFINYYEDYI 865
            |.||::|....:.:.:||::|...::::|.|.:::|:|||.|:|
  Fly   706 YLWDIIAQKKCRTDRKELLEMKGKVDYLASEHREVFLNYYNDFI 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
daoNP_001260462.1 TPR_11 165..235 CDD:290150 30/76 (39%)
TPR repeat 200..235 CDD:276809 16/35 (46%)
TPR repeat 243..270 CDD:276809 12/26 (46%)
zf-MYND 355..395 CDD:280009 20/40 (50%)
Smyd4-1NP_610500.2 zf-MYND 258..298 CDD:280009 20/40 (50%)
SET <447..526 CDD:214614 24/80 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45473057
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Homologene 1 1.000 - - H64553
Inparanoid 1 1.050 242 1.000 Inparanoid score I5680
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1278034at2759
OrthoFinder 1 1.000 - - FOG0016858
OrthoInspector 1 1.000 - - otm49561
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR46165
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X13671
109.900

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