DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dao and SmydA-4

DIOPT Version :9

Sequence 1:NP_001260462.1 Gene:dao / 34891 FlyBaseID:FBgn0028862 Length:882 Species:Drosophila melanogaster
Sequence 2:NP_572675.1 Gene:SmydA-4 / 32034 FlyBaseID:FBgn0030257 Length:532 Species:Drosophila melanogaster


Alignment Length:355 Identity:75/355 - (21%)
Similarity:123/355 - (34%) Gaps:116/355 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 GQQLKHLNADELLHKDELQLLLLITPVQRQKLSRNLEDGDLEASTSAAPLSRPENGE---EDDDL 120
            |||.|    |:...:|:.|   ..:|.:.::|...:|..|:......|. .:.|.||   .::.|
  Fly    23 GQQSK----DKQEQQDKEQ---SPSPTEEKELPYRVEHSDIYGRYLVAN-RQLEAGETLIREEPL 79

  Fly   121 IGAVGGLGISSPTTTKEPVL--DFRPHVLKWFQH----------------LRHQTGHFKSEEESR 167
              |:|      |..:.:||.  .:.|..||..|:                |:|:.||.::|.:..
  Fly    80 --AIG------PCVSGDPVCLGCYHPVSLKADQYRCPGCAWPLCGSTCAGLKHRHGHTETECQLY 136

  Fly   168 RLREAGNDSYRKERHPLKASDLFTEAIFLAPARNTLAAALAHANRSLVLFDCGLYAESYDDCLCA 232
            ..|.|            .|.:|.||....|..|:..         .||:....|....:|     
  Fly   137 AERRA------------VAGELLTERAGPAEVRDLY---------ELVMIVRILLLRQHD----- 175

  Fly   233 LDLGYPEEYLPLIKLRQAACALKLRNFAL---CEEHLHELLHI--ELNQVFEARTHELWHQCEVL 292
                 ||:: .||...::....:.:|..|   .||.:.:.|.:  :|..:...:.||:   |.:|
  Fly   176 -----PEQF-ALIARMESHTEERRQNAVLWRHYEEKVVQRLRVTWQLEDLEAEQVHEV---CGIL 231

  Fly   293 KVERFEMAVQ------------------TGDDLDINDSKAFEIAWLDNSSSLHTTRAVAKNALIF 339
            .|..||:...                  |.:....:|..:|||.       |.|:|.|.:...:.
  Fly   232 DVNCFEIGQNGAKARTLYPSAFLLAHDCTPNTAHTDDPSSFEIL-------LRTSRRVREREALT 289

  Fly   340 ESEAV---------AMVPSGN-----CRVC 355
            .|.|.         |.:..|.     ||.|
  Fly   290 LSYAYTLQGTLKRRAFMHEGKLFWCCCRRC 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
daoNP_001260462.1 TPR_11 165..235 CDD:290150 12/69 (17%)
TPR repeat 200..235 CDD:276809 5/34 (15%)
TPR repeat 243..270 CDD:276809 6/29 (21%)
zf-MYND 355..395 CDD:280009 1/1 (100%)
SmydA-4NP_572675.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.