DRSC/TRiP Functional Genomics Resources

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Protein Alignment dao and SmydA-4

DIOPT Version :10

Sequence 1:NP_609742.1 Gene:dao / 34891 FlyBaseID:FBgn0028862 Length:882 Species:Drosophila melanogaster
Sequence 2:NP_572675.1 Gene:SmydA-4 / 32034 FlyBaseID:FBgn0030257 Length:532 Species:Drosophila melanogaster


Alignment Length:355 Identity:75/355 - (21%)
Similarity:123/355 - (34%) Gaps:116/355 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 GQQLKHLNADELLHKDELQLLLLITPVQRQKLSRNLEDGDLEASTSAAPLSRPENGE---EDDDL 120
            |||.|    |:...:|:.|   ..:|.:.::|...:|..|:......|. .:.|.||   .::.|
  Fly    23 GQQSK----DKQEQQDKEQ---SPSPTEEKELPYRVEHSDIYGRYLVAN-RQLEAGETLIREEPL 79

  Fly   121 IGAVGGLGISSPTTTKEPVL--DFRPHVLKWFQH----------------LRHQTGHFKSEEESR 167
              |:|      |..:.:||.  .:.|..||..|:                |:|:.||.::|.:..
  Fly    80 --AIG------PCVSGDPVCLGCYHPVSLKADQYRCPGCAWPLCGSTCAGLKHRHGHTETECQLY 136

  Fly   168 RLREAGNDSYRKERHPLKASDLFTEAIFLAPARNTLAAALAHANRSLVLFDCGLYAESYDDCLCA 232
            ..|.|            .|.:|.||....|..|:..         .||:....|....:|     
  Fly   137 AERRA------------VAGELLTERAGPAEVRDLY---------ELVMIVRILLLRQHD----- 175

  Fly   233 LDLGYPEEYLPLIKLRQAACALKLRNFAL---CEEHLHELLHI--ELNQVFEARTHELWHQCEVL 292
                 ||:: .||...::....:.:|..|   .||.:.:.|.:  :|..:...:.||:   |.:|
  Fly   176 -----PEQF-ALIARMESHTEERRQNAVLWRHYEEKVVQRLRVTWQLEDLEAEQVHEV---CGIL 231

  Fly   293 KVERFEMAVQ------------------TGDDLDINDSKAFEIAWLDNSSSLHTTRAVAKNALIF 339
            .|..||:...                  |.:....:|..:|||.       |.|:|.|.:...:.
  Fly   232 DVNCFEIGQNGAKARTLYPSAFLLAHDCTPNTAHTDDPSSFEIL-------LRTSRRVREREALT 289

  Fly   340 ESEAV---------AMVPSGN-----CRVC 355
            .|.|.         |.:..|.     ||.|
  Fly   290 LSYAYTLQGTLKRRAFMHEGKLFWCCCRRC 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
daoNP_609742.1 TPR repeat 200..235 CDD:276809 5/34 (15%)
TPR repeat 243..270 CDD:276809 6/29 (21%)
SET <459..657 CDD:394802
SmydA-4NP_572675.1 SET_SMYD <230..319 CDD:380997 19/95 (20%)
Blue background indicates that the domain is not in the aligned region.

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