DRSC/TRiP Functional Genomics Resources

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Protein Alignment dao and SmydA-9

DIOPT Version :10

Sequence 1:NP_609742.1 Gene:dao / 34891 FlyBaseID:FBgn0028862 Length:882 Species:Drosophila melanogaster
Sequence 2:NP_572539.2 Gene:SmydA-9 / 31859 FlyBaseID:FBgn0030102 Length:500 Species:Drosophila melanogaster


Alignment Length:541 Identity:95/541 - (17%)
Similarity:170/541 - (31%) Gaps:164/541 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 DLDINDSKAFEIAWLDNSSSLH-----TTRAVAKNALIFESE----AVAMVPSGNCRVCDYCGIT 361
            ||.:...|..:.||....|.:.     .||::.:..:||...    .:|.....:...|..|  .
  Fly    12 DLHLAPFKDKDPAWEIGVSKIAGRGVVATRSLKRGEIIFRDSPLLIGLAAHEEDSLNACSVC--L 74

  Fly   362 QFIP---FPCIY-CSNRLVVYCSRQCRFKHAAIHAVECFGHQIELFESFGEVFGMPRLLQLAFRM 422
            :.:|   |.|.. |...:...|:::.:      |..:|     :||:|:|     |....:|..:
  Fly    75 KMLPDTRFMCRQGCGLPVCSLCAKKKQ------HKSDC-----DLFKSWG-----PNEPDVANSV 123

  Fly   423 LITGLPELLGHCRKKPTLSKLWSAINGGLQERQDIAYSAVLRLERLKEERPTDTVIALALAAHIL 487
            :|    .||...|          |||.. :|::|:.|.....|:   ....|:...|        
  Fly   124 II----RLLCVAR----------AINLS-KEQRDLIYCLQANLD---NNHRTEVRNA-------- 162

  Fly   488 SIYLSKCTTFFDQLEKSLPTASRMSSAEWELLCAALLMRHIGQLRHRSLTACRSFVLPADPHVFS 552
                :||.       |:.||..::.                 ::.:|::...|:..........:
  Fly   163 ----AKCF-------KNFPTDKKLI-----------------EIMNRTVAVLRTNGFDKTTDRTN 199

  Fly   553 PLNEFQLWAAPMRLQEGHLHLLAGEVAVVSYSVYPDTLNLCRHSCSSTICAKFSGRT--VTALAL 615
            ...||...|                       :|| ...:..|.|.......|..:|  :...|.
  Fly   200 DNQEFNYRA-----------------------LYP-LFGVVNHDCIPNAYYTFEEKTNNMIVRAA 240

  Fly   616 LDLPAGSGI---YNCFAGGNFQQLPREERTKQLLESGIRCHCNACQLTHSDDQFHKFHRYRCDNP 677
            :|:|.|..:   |.....||   :.|....|  ::....|.|:.|........|  .....|.:.
  Fly   241 VDIPEGFEVTTTYTKLFTGN---IARHLFLK--MKKSFTCKCSRCSDPTEKGAF--ISGLYCRDT 298

  Fly   678 NCMEIFTP--NALPHAPSLRWWLSEEYTQPEFNGADLIMCPHCGEYQKLEWFWAFTTSLIDCELI 740
            ||..:..|  ..|||              |.:|   .::|.....:.::.....|.:..|:.::.
  Fly   299 NCTGLVVPEITGLPH--------------PNWN---CLVCKQKSTHAQMMKSQDFASGAINAKVN 346

  Fly   741 EERCKL-----------------YAAIERAENQLMDLHECKVALARLLLEQCLMVHREGATVLDD 788
            ....:.                 |..|:...:.|..|.:.:...:..|.....:.:....|.|.|
  Fly   347 SNSLRTLVQYLNEKSDSFIPSSNYVVIDAKMSVLQRLQQGREDCSEELAHNTRLRYSRDITQLMD 411

  Fly   789 WEFNKLG---SILRSVLPSVM 806
                |||   |:||:.|..::
  Fly   412 ----KLGLGDSLLRTHLEELL 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
daoNP_609742.1 TPR repeat 200..235 CDD:276809
TPR repeat 243..270 CDD:276809
SET <459..657 CDD:394802 31/202 (15%)
SmydA-9NP_572539.2 SET 26..>49 CDD:394802 3/22 (14%)
SET_SMYD <183..280 CDD:380997 21/125 (17%)
Blue background indicates that the domain is not in the aligned region.

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