DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dao and set-10

DIOPT Version :9

Sequence 1:NP_001260462.1 Gene:dao / 34891 FlyBaseID:FBgn0028862 Length:882 Species:Drosophila melanogaster
Sequence 2:NP_493620.2 Gene:set-10 / 185237 WormBaseID:WBGene00009370 Length:430 Species:Caenorhabditis elegans


Alignment Length:446 Identity:90/446 - (20%)
Similarity:137/446 - (30%) Gaps:161/446 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   357 YCGITQFIPF------PCIYCSNRLVV-YCSRQCRFKH-AAIHAVECFGHQIELFESFGEVFGMP 413
            ||. |.|:..      ..:.|.:.|.| ||:.:|:.|. .:.|..||     |:....|....|.
 Worm    22 YCA-TCFLEIDSSQETEILTCDDCLAVSYCTLKCQRKDWKSCHQFEC-----EILRCQGSSTPMT 80

  Fly   414 RLLQLAFRMLITGLPELLGHCRKKPTLSKLWSAINGGLQERQDIAYSAVLRLERLKEERPTDTVI 478
            ..::|..|:|:..        |...|.|     .||.:.|..:..|         ||.|.:    
 Worm    81 LTMKLCIRVLLAS--------RSTQTPS-----FNGAVLEDLETNY---------KEFRSS---- 119

  Fly   479 ALALAAHILSIYLSKCTTFFDQLEKSLPTASRMSSAEWELLCAALLMRHIGQLRHRSLTACRSFV 543
                ..|  :.:||...|......:::...|..::....::|:.|               |.|  
 Worm   120 ----PEH--NQFLSDVLTIISSSGQNIFPTSLETNKTIGIICSVL---------------CNS-- 161

  Fly   544 LPADPHVFSPLNEFQLWAAPMRLQEGHLHLLAGEVAVVSYSVYPDTLNLCRHSCSSTICAKFSGR 608
                   ||.:||.::......|.          |.|..::          |||:||....|.|.
 Worm   162 -------FSIINEKRVEPIGSGLY----------VGVAKHN----------HSCASTSHVVFEGN 199

  Fly   609 TVTALALLDLPAGSGIYNCFAGGNFQQ-------------LPREERTKQLLESGIR---CHCNAC 657
            .|                 |...|.::             ||..||.|.:  .|:.   |.|..|
 Worm   200 QV-----------------FLRTNQEEYSKELTISYVSRMLPTSERRKTI--RGVHFLTCQCEMC 245

  Fly   658 QLTHSD--DQFHKFHRYRC-----DNPNCMEIFTPNALPHAPSLRWWLSEEYTQPEFNGADLIMC 715
            :....|  ....|.....|     .:.||........||...|:...|         |..|:|  
 Worm   246 KNEELDLIGLSSKCRTKNCTGFVKGSGNCSVCEKLAFLPFEQSIHSTL---------NLLDII-- 299

  Fly   716 PHCGEYQKLEWFWAFTTSLIDCELIEERCKLYAAIERAENQLMD-LHECKVALARL 770
                  :.|.....|||       ::|    .|.:::......| |.||.||:.:|
 Worm   300 ------ENLHKTNQFTT-------VQE----LAYLQKLRADYQDILAECNVAILQL 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
daoNP_001260462.1 TPR_11 165..235 CDD:290150
TPR repeat 200..235 CDD:276809
TPR repeat 243..270 CDD:276809
zf-MYND 355..395 CDD:280009 12/45 (27%)
set-10NP_493620.2 zf-MYND 23..67 CDD:366792 11/44 (25%)
SET 57..247 CDD:394802 55/289 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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