DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dao and set-30

DIOPT Version :9

Sequence 1:NP_001260462.1 Gene:dao / 34891 FlyBaseID:FBgn0028862 Length:882 Species:Drosophila melanogaster
Sequence 2:NP_508850.2 Gene:set-30 / 180772 WormBaseID:WBGene00022499 Length:560 Species:Caenorhabditis elegans


Alignment Length:466 Identity:82/466 - (17%)
Similarity:132/466 - (28%) Gaps:211/466 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   351 NCRVCDYCG--ITQFIPFPCIYCSNRLVVYCSRQCRFKHAAIHAVECFGHQIELFESFGEVFGMP 413
            :|...|||.  :.:.:...|..|  ::..:||:||....|..|..||                  
 Worm    34 DCTKDDYCWTCLGENVELTCEQC--KVAKFCSKQCETSGAIDHKYEC------------------ 78

  Fly   414 RLLQLAFRMLITGLPELLGHCRKKPTLSKLWSAINGGLQERQDIAYSAVLRLERLKEERPTDTVI 478
                              |..:|.|.|:                                ||..:
 Worm    79 ------------------GPLKKCPDLN--------------------------------TDERM 93

  Fly   479 ALALAAHILSIYLSKCTT---FFDQLEKSLPTASRMSSAE-WELLCAALLMRHIGQLRHRSLTAC 539
            .:.:......|:..|..:   |::..|      |:.|..| ||         |...:: :...|.
 Worm    94 LIRIVGRYKDIHSGKDKSIDGFYNNRE------SKRSVMEIWE---------HCADMK-KDENAM 142

  Fly   540 RSFVLPAD--------PHVFSPLNEFQLWAAPMRLQEGHLHLLAGEVAVVSY------SVYPDTL 590
            :||....|        .|:......|||        .....:....::.|.|      .:|   |
 Worm   143 KSFKKTYDRVKQFGDTNHLMDEEVTFQL--------HSRNFINRHSISNVDYLREIGKGLY---L 196

  Fly   591 NLCR--HSCSSTICAKFSGRTVTALAL---LDLPAGSGIYNCFAGGNFQQLP--REERTKQLLES 648
            :||:  |||........:|......||   :||......:..:.     :||  :.:|...|.|:
 Worm   197 DLCKYDHSCRPNAIYSCNGIVAKLRALHDNVDLENVETTHYTYI-----ELPPCKIQRRHMLKET 256

  Fly   649 G-IRCHCNACQLTHSDDQFHKFHRYRCDNPNCMEIFTPNALPHAPSLRWWLSEEYTQPEFNGADL 712
            . ..|||.                 |||:|:      .|          ||:.            
 Worm   257 WYFECHCE-----------------RCDDPD------DN----------WLTS------------ 276

  Fly   713 IMCPHC---GEYQKLEWFWAFTTSL---------IDCELIEERCK-----------------LYA 748
            ::||.|   .||:|       |..|         ...|::.:||.                 :..
 Worm   277 VLCPVCISKTEYRK-------TIKLHGPEAYANPETLEIVCDRCSTTLDREYIFMALDGMRTIRR 334

  Fly   749 AIERAENQLMD 759
            .:|.||::..|
 Worm   335 TVEGAEDETKD 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
daoNP_001260462.1 TPR_11 165..235 CDD:290150
TPR repeat 200..235 CDD:276809
TPR repeat 243..270 CDD:276809
zf-MYND 355..395 CDD:280009 11/41 (27%)
set-30NP_508850.2 zf-MYND 41..78 CDD:366792 9/38 (24%)
SET_SMYD <179..266 CDD:380997 22/111 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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