DRSC/TRiP Functional Genomics Resources

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Protein Alignment dao and SMYD1

DIOPT Version :9

Sequence 1:NP_001260462.1 Gene:dao / 34891 FlyBaseID:FBgn0028862 Length:882 Species:Drosophila melanogaster
Sequence 2:NP_938015.1 Gene:SMYD1 / 150572 HGNCID:20986 Length:490 Species:Homo sapiens


Alignment Length:407 Identity:82/407 - (20%)
Similarity:127/407 - (31%) Gaps:138/407 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 KVERFEMAVQTGDDLDINDSKAFEIAWLDNSSSLHTTRAVAKNALIFESEAVAMVPSGNCRVCDY 357
            ::|..|:....|....:..:|.|   |.  :..:...||.  :|::|:|    :|..    ||..
Human     5 RMENVEVFTAEGKGRGLKATKEF---WA--ADIIFAERAY--SAVVFDS----LVNF----VCHT 54

  Fly   358 CGITQFIPFPCIYCSNRLVVYCSRQCRFKHAAIHAVECFGHQIELFESFGEVFGMP-RLLQLAFR 421
            |...|.....|..|  :...||.|.|:......|..||     ...:.:|:|   | ..::||.|
Human    55 CFKRQEKLHRCGQC--KFAHYCDRTCQKDAWLNHKNEC-----SAIKRYGKV---PNENIRLAAR 109

  Fly   422 MLI------TGLPELLGHCRKKPTLSKLWSAINGGLQERQDIAYSAVLRLERLKEERPTDTVIAL 480
            ::.      |||.|                   |.|....|:..    .:|...||...|..:.:
Human   110 IMWRVEREGTGLTE-------------------GCLVSVDDLQN----HVEHFGEEEQKDLRVDV 151

  Fly   481 ALAAHILSIYLSKCTTFFDQLEKSLPTASRMSSAEWELLCAALLMRHI-GQLRHRSLTACRSFVL 544
                              |...:..|..|:..|.::        :.|| |.:.      |..|.|
Human   152 ------------------DTFLQYWPPQSQQFSMQY--------ISHIFGVIN------CNGFTL 184

  Fly   545 PADPHVFSPLNEFQLWAAPMRLQEGHLHLLAGEVAVVSYSVYPDTLNLCRHSCSSTICAKFSGRT 609
             :|                   |.|        :..|...::|: |.|..|.|.......|:...
Human   185 -SD-------------------QRG--------LQAVGVGIFPN-LGLVNHDCWPNCTVIFNNGN 220

  Fly   610 VTAL-------------ALLDLPAGSGIYNCFAGGNFQQLPREERTKQLLES-GIRCHCNACQLT 660
            ..|:             ||..:..|..:...:.  :|..: .|||.:||.:. ...|.|..||..
Human   221 HEAVKSMFHTQMRIELRALGKISEGEELTVSYI--DFLNV-SEERKRQLKKQYYFDCTCEHCQKK 282

  Fly   661 HSDDQFHKFHRYRCDNP 677
            ..||.|....    |||
Human   283 LKDDLFLGVK----DNP 295

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
daoNP_001260462.1 TPR_11 165..235 CDD:290150
TPR repeat 200..235 CDD:276809
TPR repeat 243..270 CDD:276809
zf-MYND 355..395 CDD:280009 10/39 (26%)
SMYD1NP_938015.1 S-adenosyl-L-methionine binding. /evidence=ECO:0000250 17..19 0/1 (0%)
zf-MYND 52..90 CDD:307734 10/39 (26%)
SET <194..257 CDD:214614 11/65 (17%)