DRSC/TRiP Functional Genomics Resources

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Protein Alignment dao and SmydA-4

DIOPT Version :10

Sequence 1:NP_609742.1 Gene:dao / 34891 FlyBaseID:FBgn0028862 Length:882 Species:Drosophila melanogaster
Sequence 2:XP_061514871.1 Gene:SmydA-4 / 1268645 VectorBaseID:AGAMI1_003090 Length:528 Species:Anopheles gambiae


Alignment Length:535 Identity:104/535 - (19%)
Similarity:177/535 - (33%) Gaps:156/535 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   367 PCIYCSNRLVVYCSRQCRFKHAAIHAVECFGHQIELFESFGEVFGMPRLLQLAFRMLITGLPELL 431
            |.:..|..::..||...|...|.:.......:.::..|..|......|.|: |..::|...|.::
Mosquito    16 PKLNHSKEIINPCSEYDRQPVAEVQLESSKPYLVKRSEQVGRYIVAARDLK-AGDVIIETPPFVV 79

  Fly   432 GHCRK-KPTLSKLWSAINGGLQERQDIAYSAVLRLERLKEERPTDTVIALALAAHILSIYLSKCT 495
            |.|.: :|......:|...|         |.|.|.|.......:.:...||.|.....:   :|.
Mosquito    80 GPCAETEPVCLGCHNAFKPG---------SVVYRCEICNWRICSPSCHGLAPAGTHRQL---ECI 132

  Fly   496 TFFDQ-LEKSL---PTASRMSSAEWELLCAALLMRHIGQLRHRSLTACRSFVLPADPHVFSPLNE 556
            ...|: :.|.|   |||......|..|....:|::.:.:.::..|..            ..|||:
Mosquito   133 PLRDKAVHKHLQTSPTAQVKLMYEAILTLRCMLLKTVDRPQYDRLLG------------MDPLND 185

  Fly   557 F-----QLW-------AAPMRLQEG-------HLHLLAGEVAVVSYSV----------YPDTLNL 592
            .     :||       ...:|.|.|       .||.:.|.:.|.::.|          :|:.. |
Mosquito   186 VRQQIPKLWNRNQKEIVERIRNQWGFAEYSELELHTICGIIEVNAFEVGQEPTKARALFPEAY-L 249

  Fly   593 CRHSCSSTICAKFSGRT-------VTALALLDLPAGSGIYNCFAGGNFQQLPREERTKQLLESGI 650
            ..|.|:..     :|.|       :|...|.|:.||..:...:|......|.|.:..::  |...
Mosquito   250 LMHDCTPN-----TGHTDAPQTHHLTVRVLRDVKAGEPLTLTYAHILQGTLKRRQHLRE--EKFF 307

  Fly   651 RCHCNACQLTHSDDQFHKFHRYRCDNPN----------CMEIFTPNALPHAPSLRWWLSEEYTQP 705
            .|:|.                 ||.:|:          |.:....:.||..|          ..|
Mosquito   308 SCNCR-----------------RCTDPSELGTNCSALRCKKCPRGHILPTDP----------LNP 345

  Fly   706 EFNGADLIMCPHCGEYQKLEWFWAFTTSLIDCELIEERCKLYAAIERAENQLMDLHECKVALARL 770
            |                 .||.....::::.||.:      ...:|:...||..:....|.    
Mosquito   346 E-----------------TEWHCRQCSTVMSCEAV------ILLLEQLSQQLETIGGNDVD---- 383

  Fly   771 LLEQCLMVHREGATVLDDWEFNKLGSILRSVLPSVMAQYGGQSIEYVKYFSYFWDVMALSNYKCN 835
            .||..|.|  :|| ||.|..:     :|.||..|:...||       |...:....::....|..
Mosquito   384 GLETFLRV--QGA-VLHDNHY-----LLLSVKHSLCELYG-------KIEGFLIPQLSREQLKRK 433

  Fly   836 D---RELMQMLNALE 847
            :   |:|:::::.||
Mosquito   434 ETLCRDLLEVVDQLE 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
daoNP_609742.1 TPR repeat 200..235 CDD:276809
TPR repeat 243..270 CDD:276809
SET <459..657 CDD:394802 48/237 (20%)
SmydA-4XP_061514871.1 None
Blue background indicates that the domain is not in the aligned region.

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