DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4168 and CYR1

DIOPT Version :9

Sequence 1:NP_001285953.1 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster
Sequence 2:NP_012529.3 Gene:CYR1 / 853452 SGDID:S000003542 Length:2026 Species:Saccharomyces cerevisiae


Alignment Length:1225 Identity:259/1225 - (21%)
Similarity:437/1225 - (35%) Gaps:376/1225 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GPPSSSGGR--------GSAALLGSQQQDILYACPLNSMCQCAGLPNETSTLIE---INCNEVAL 88
            ||||....|        .|....|......:..|..|       :||::.|.::   :|..:..|
Yeast   499 GPPSKKDSRHHHDRKDNESMVTAGDSNSSFVDICKEN-------VPNDSKTALDTKSVNRLKSNL 556

  Fly    89 YKFPEFMHSSVRYIEMSNTHLQSVDDETFQGLRLKTLKLIDNELQDISERSFSTMTHSLMTLDIS 153
            ...|    .|:||   :.::|....|.:.....|.:..:...:....|:.|..|..:      :.
Yeast   557 AMSP----PSIRY---APSNLDGDYDTSSTSSSLPSSSISSEDTSSCSDSSSYTNAY------ME 608

  Fly   154 GNKMQHLPLDALQRLHSLS-RLVAQRNHITTLDGNWDAQHDTLRSLHLSDN-----------DIT 206
            .|:.|......|.:..|.: :..:...::.:.||   ||...|......|:           |.:
Yeast   609 ANREQDNKTPILNKTKSYTKKFTSSSVNMNSPDG---AQSSGLLLQDEKDDEVECQLEHYYKDFS 670

  Fly   207 EVAPGGG-SIEVVSQNDNSSQPSSLAAVQTRLETSNSIYPPSPSSGDRTTGG------------- 257
            ::.|... :|.:.:.:|..:..|...|.     |...|.|......:.|..|             
Yeast   671 DLDPKRHYAIRIFNTDDTFTTLSCTPAT-----TVEEIIPALKRKFNITAQGNFQISLKVGKLSK 730

  Fly   258 ------RPFEQLQKLLWL---------------DLS--NNRIYH--VAGNYLPR--------SLV 289
                  :|....:|||.|               |||  ...::|  ...::.|.        ..|
Yeast   731 ILRPTSKPILIERKLLLLNGYRKSDPLHIMGIEDLSFVFKFLFHPVTPSHFTPEQEQRIMRSEFV 795

  Fly   290 TMDLSSNLLTVFPQQLFEQLPELRI--VSLRDNLIRSVQWKELQVRPLRMHLERLDLGQNCIENL 352
            .:||.:..||..|...::...|:..  ||...|:...:::.|..::.|.:.:          .|:
Yeast   796 HVDLRNMDLTTPPIIFYQHTSEIESLDVSNNANIFLPLEFIESSIKLLSLRM----------VNI 850

  Fly   353 ESDYFQQNYSDVH-LRALNLEQNFVTQLPEAVFKATGIAHLVLAFNAISRVHPSAFEGLTETLEY 416
            .:..|..|.:..: |.:|.|::||:.::|.::.|.:.:..|.|..|.:..: |:.|..| :.|:.
Yeast   851 RASKFPSNITKAYKLVSLELQRNFIRKVPNSIMKLSNLTILNLQCNELESL-PAGFVEL-KNLQL 913

  Fly   417 LDLERNRLTTVPVALSSLHHLKYLYLTSNQISQLNNLPSFTENLRVLSLSGNNFSMIPVLGLKNY 481
            |||..|:....|..::...:|..:.|:.|:|..|.....:...|..::||.|..:.|.  .|...
Yeast   914 LDLSSNKFMHYPEVINYCTNLLQIDLSYNKIQSLPQSTKYLVKLAKMNLSHNKLNFIG--DLSEM 976

  Fly   482 TQLSYLNMGYNSITDIPEGIFAVDSWGSNLQTILLRNNKITHLH--LGSFAGLEQIQE---ISLS 541
            |.|..||:.||.|:.|...       .||||.:.|.:|:|::..  |.....|| |||   .|:|
Yeast   977 TDLRTLNLRYNRISSIKTN-------ASNLQNLFLTDNRISNFEDTLPKLRALE-IQENPITSIS 1033

  Fly   542 FNDITIHHPLVFENV-SRTLKILELSFAVFPARSLESLDPLDALLPLSQLIWLGLDNNNLKQVSN 605
            |.|.   :|   :|: |.||...:||..           |.:.|..||.|..|.|:.|||.::..
Yeast  1034 FKDF---YP---KNMTSLTLNKAQLSSI-----------PGELLTKLSFLEKLELNQNNLTRLPQ 1081

  Fly   606 ESFAQMRELSYINLSFNQLKTLPRGLFQSDAHSHLVEIDLSYNGLERLEAQTFHSLGDLQTLNLQ 670
            | .:::.:|.:::::.|:|:.:|..|.|                           |..|:||:|.
Yeast  1082 E-ISKLTKLVFLSVARNKLEYIPPELSQ---------------------------LKSLRTLDLH 1118

  Fly   671 SNRLRTIARHAFHNLEFLRYLDLSYNRLVNISHGAFTVLPNLAALDLMHNQLCSLSLKSFLYVSN 735
            ||.:|... ....|||                         |.:|::..|...:.||::      
Yeast  1119 SNNIRDFV-DGMENLE-------------------------LTSLNISSNAFGNSSLEN------ 1151

  Fly   736 TTTPLRLNVSHNHIASFYDELSSYMYIYQLDISHNHVTKSDSFTNLANTLRFLNLAHNQLGSLQS 800
                           |||..:|     |.              :.|:.:|.|...|.||......
Yeast  1152 ---------------SFYHNMS-----YG--------------SKLSKSLMFFIAADNQFDDAMW 1182

  Fly   801 HAFGDLEFLEILNVAHNNLTSLRRRSFQGLNSLQELDLSHNQLDQLQVEQFSNLRKLRILRINSN 865
            ..|.....|::||:::||.:.:   |...|.|:.||.||.|:|..|..:.......|:.|.:|||
Yeast  1183 PLFNCFVNLKVLNLSYNNFSDV---SHMKLESITELYLSGNKLTTLSGDTVLKWSSLKTLMLNSN 1244

  Fly   866 RLRALPREVFMNTRLEFLDIAENQLSVWPVPAFTDIGFTLRSIQMSH------NN--LEYLDASM 922
            ::.:||.|:...::|...|:..|||..              :|...|      ||  |:||:.| 
Yeast  1245 QMLSLPAELSNLSQLSVFDVGANQLKY--------------NISNYHYDWNWRNNKELKYLNFS- 1294

  Fly   923 FINSQFLYDISLARNRITILPDNTFSFLNNLTNLDLSQNPLVTTNLREVFVHTPRLRKLSLHHMG 987
                        ...|..|.     ||:::..:.|||.                           
Yeast  1295 ------------GNRRFEIK-----SFISHDIDADLSD--------------------------- 1315

  Fly   988 LYVLPPLKLPLLSYLDVSGNYLQELSPLGSLRHLRHVNVSHNKLTNASCAAEHLPPSVRVLDLAH 1052
            |.|||.||  :|..:||:.|..:          :...||:....|.||..               
Yeast  1316 LTVLPQLK--VLGLMDVTLNTTK----------VPDENVNFRLRTTASII--------------- 1353

  Fly  1053 NPLRRITLHDLASLRHLAELNILDVKVTNPQAFSKLRS-----LRKLHAS--SHANLGEIVARIP 1110
            |.:|......|....:::..::         .|.:.|.     |..||.|  .:|:.|..::||.
Yeast  1354 NGMRYGVADTLGQRDYVSSRDV---------TFERFRGNDDECLLCLHDSKNQNADYGHNISRIV 1409

  Fly  1111 GLQQLRVHCLEPNIGQQLFAKLANNTKIRLLELYG----SNVQTIAPDVFTGLSR 1161
                           :.::.|:.    ||.||.||    .|::|.....|..|::
Yeast  1410 ---------------RDIYDKIL----IRQLERYGDETDDNIKTALRFSFLQLNK 1445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4168NP_001285953.1 leucine-rich repeat 99..118 CDD:275380 4/18 (22%)
LRR_8 121..181 CDD:290566 8/60 (13%)
LRR_RI 122..350 CDD:238064 47/288 (16%)
leucine-rich repeat 122..146 CDD:275380 4/23 (17%)
leucine-rich repeat 147..170 CDD:275380 3/22 (14%)
leucine-rich repeat 171..194 CDD:275380 4/23 (17%)
leucine-rich repeat 195..214 CDD:275380 4/30 (13%)
leucine-rich repeat 215..236 CDD:275380 4/20 (20%)
LRR_8 265..322 CDD:290566 19/85 (22%)
leucine-rich repeat 266..287 CDD:275380 8/47 (17%)
leucine-rich repeat 288..311 CDD:275380 6/22 (27%)
leucine-rich repeat 312..338 CDD:275380 5/27 (19%)
LRR_RI 315..546 CDD:238064 63/236 (27%)
leucine-rich repeat 339..365 CDD:275380 3/25 (12%)
LRR_8 365..424 CDD:290566 18/59 (31%)
leucine-rich repeat 366..388 CDD:275380 7/21 (33%)
leucine-rich repeat 389..412 CDD:275380 6/22 (27%)
LRR_8 413..470 CDD:290566 15/56 (27%)
leucine-rich repeat 414..436 CDD:275380 6/21 (29%)
leucine-rich repeat 437..459 CDD:275380 5/21 (24%)
leucine-rich repeat 460..483 CDD:275380 6/22 (27%)
LRR_8 482..545 CDD:290566 24/67 (36%)
leucine-rich repeat 484..510 CDD:275380 7/25 (28%)
leucine-rich repeat 511..534 CDD:275380 7/24 (29%)
leucine-rich repeat 535..589 CDD:275380 17/57 (30%)
LRR_RI 588..891 CDD:238064 69/302 (23%)
LRR_8 588..650 CDD:290566 14/61 (23%)
leucine-rich repeat 590..613 CDD:275380 7/22 (32%)
leucine-rich repeat 614..639 CDD:275380 6/24 (25%)
LRR_8 638..698 CDD:290566 11/59 (19%)
leucine-rich repeat 640..663 CDD:275380 1/22 (5%)
leucine-rich repeat 664..687 CDD:275380 9/22 (41%)
LRR_8 688..749 CDD:290566 5/60 (8%)
leucine-rich repeat 688..711 CDD:275380 0/22 (0%)
leucine-rich repeat 712..735 CDD:275380 5/22 (23%)
leucine-rich repeat 740..783 CDD:275380 6/42 (14%)
LRR_8 784..843 CDD:290566 19/58 (33%)
leucine-rich repeat 785..808 CDD:275380 6/22 (27%)
leucine-rich repeat 809..832 CDD:275380 7/22 (32%)
LRR_RI <827..1053 CDD:238064 52/233 (22%)
LRR_8 832..890 CDD:290566 19/57 (33%)
leucine-rich repeat 833..856 CDD:275380 7/22 (32%)
leucine-rich repeat 857..879 CDD:275380 8/21 (38%)
leucine-rich repeat 880..900 CDD:275380 5/19 (26%)
LRR_8 904..963 CDD:290566 15/66 (23%)
leucine-rich repeat 905..928 CDD:275380 8/30 (27%)
leucine-rich repeat 929..952 CDD:275380 4/22 (18%)
leucine-rich repeat 953..977 CDD:275380 3/23 (13%)
leucine-rich repeat 978..1020 CDD:275380 10/41 (24%)
LRR_8 1019..1074 CDD:290566 8/54 (15%)
leucine-rich repeat 1045..1068 CDD:275380 3/22 (14%)
leucine-rich repeat 1069..1090 CDD:275380 1/20 (5%)
leucine-rich repeat 1091..1114 CDD:275380 8/24 (33%)
leucine-rich repeat 1115..1161 CDD:275380 11/49 (22%)
leucine-rich repeat 1162..1190 CDD:275380 259/1225 (21%)
CYR1NP_012529.3 Ad_cyc_g-alpha 368..418 CDD:369912
RA_PHLPP_like 678..776 CDD:340473 18/102 (18%)
PLN00113 792..>1273 CDD:215061 150/630 (24%)
leucine-rich repeat 796..817 CDD:275380 5/20 (25%)
leucine-rich repeat 818..839 CDD:275380 4/20 (20%)
leucine-rich repeat 840..864 CDD:275380 4/33 (12%)
leucine-rich repeat 865..887 CDD:275380 7/21 (33%)
leucine-rich repeat 888..910 CDD:275380 6/23 (26%)
leucine-rich repeat 911..933 CDD:275380 6/21 (29%)
leucine-rich repeat 934..956 CDD:275380 5/21 (24%)
leucine-rich repeat 957..978 CDD:275380 6/22 (27%)
leucine-rich repeat 979..1018 CDD:275380 15/45 (33%)
leucine-rich repeat 1019..1041 CDD:275380 10/28 (36%)
leucine-rich repeat 1042..1065 CDD:275380 8/33 (24%)
leucine-rich repeat 1066..1088 CDD:275380 7/22 (32%)
leucine-rich repeat 1089..1111 CDD:275380 7/48 (15%)
leucine-rich repeat 1167..1187 CDD:275380 6/19 (32%)
leucine-rich repeat 1191..1211 CDD:275380 7/22 (32%)
leucine-rich repeat 1236..1258 CDD:275380 8/21 (38%)
leucine-rich repeat 1259..1287 CDD:275380 9/41 (22%)
PP2C 1374..1617 CDD:395385 21/100 (21%)
CYCc 1613..1825 CDD:214485
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.870

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