DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4168 and RLP13

DIOPT Version :9

Sequence 1:NP_001285953.1 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster
Sequence 2:NP_001322432.1 Gene:RLP13 / 843757 AraportID:AT1G74170 Length:1068 Species:Arabidopsis thaliana


Alignment Length:1226 Identity:279/1226 - (22%)
Similarity:449/1226 - (36%) Gaps:400/1226 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 LIDNELQDISERSFSTMTH---SLMTLDISGNK------MQHLPLDALQRLHSLSRLVAQRNHIT 182
            :|:|.|.::|      :.|   .:.:||:|.::      ...| .|.::...|||||   ||   
plant    90 IIENPLLNLS------LLHPFEDVRSLDLSSSRSCEDCGFSGL-FDDVEGYKSLSRL---RN--- 141

  Fly   183 TLDGNWDAQHDTLRSLHLSDNDITEVAPGGGSIEVVSQNDNSSQP--SSLAAVQTRLETSNSIYP 245
                        |..|.||.:                :.:||..|  ::..::.|...|.|:::.
plant   142 ------------LEILDLSSH----------------RFNNSIFPFLNAATSLTTLFLTYNNMHS 178

  Fly   246 PSPSSGDRTTGGRPFEQLQKLLWLDLSNNRI--------YHVAGNYLPRSLVTMDLSSNLLT--V 300
            |...        :.|:.|..|..|||..||.        |:....:  |.|..:|||.||..  :
plant   179 PFLV--------KEFKDLTNLEHLDLRGNRFNGSIPTQDYNSLRRF--RKLEILDLSDNLFNSRI 233

  Fly   301 FPQQLFEQLPELRIVSL-RDNLIRSVQWKELQVRPLRMHLERLDLGQNCIENLESDYFQQNYSDV 364
            ||  .......|:.:|| .:|:......|||  |.| .::|.|||.:|....  |...:..::..
plant   234 FP--FLNSATSLKSLSLWGNNMGGPFPAKEL--RDL-TNVELLDLSRNRFNG--SIPVRALFALR 291

  Fly   365 HLRALNLEQNFVTQLPEAVFKATGIAHLVLAFNAISRVHPSAFEGLTETLEYLDLERNRLT-TVP 428
            .|:||:|..|..:...|...|             .::..|.:.....:.:|.|.|..|:|. ..|
plant   292 KLKALDLSDNEFSSSVELQGK-------------FAKTKPLSGTCPWKNMEELKLSNNKLAGQFP 343

  Fly   429 VALSSLHHLKYLYLTSNQISQLNNLPSF---TENLRVLSLSGNNFSMIPVLG-LKNYTQLSYLNM 489
            :.|:||..|:.|.|:|||::  .|:||.   .|:|..|||.||||.....|| |.|.::|..|.:
plant   344 LCLTSLTGLRVLDLSSNQLT--GNVPSALANLESLEYLSLFGNNFEGFFSLGLLANLSKLKVLRL 406

  Fly   490 GYNSITDIPEGIFAVDSWGSNLQ--TILLRN---NKITHLHLGSFAGLEQIQEISLSFNDITIHH 549
              :|.::..|..|.. ||....|  .|.||:   .|:.|..|..    :.:..:.||.|.|    
plant   407 --DSQSNSLEVEFET-SWKPKFQLVVIALRSCNLEKVPHFLLHQ----KDLHHVDLSDNQI---- 460

  Fly   550 PLVFENVSRTLKILELSFAVFPARSLESLDPLDALLPLSQLIWLGLDNNNLKQVSNESFAQMREL 614
                             ...||:..||:...|:.||         |.||:.........|  ..|
plant   461 -----------------HGNFPSWLLENNTKLEVLL---------LQNNSFTSFQLPKSA--HNL 497

  Fly   615 SYINLSFNQLK---------TLPRGLFQSDAHSHLVEIDLSYNGLERLEAQTFHSLGDLQTLNLQ 670
            .::|:|.|:..         .||          |||.::|:|||.:.               ||.
plant   498 LFLNVSVNKFNHLFLQNFGWILP----------HLVCVNLAYNGFQG---------------NLP 537

  Fly   671 SNRLRTIARHAFHNLEFLRYLDLSYNRLVNISHGAFTVLP--------NLAALDLMHNQLCSLSL 727
            |         :..|::.:.:||||:||.    ||.   ||        ||..|.|.||:   ||.
plant   538 S---------SLDNMKSIEFLDLSHNRF----HGK---LPRRFLKGCYNLTILKLSHNK---LSG 583

  Fly   728 KSFLYVSNTTTPLRLNVSHN----HIASFYDELSSYMYIYQLDISHNHVT-KSDSFTNLANTLRF 787
            :.|...:|.|....:::.:|    :|...:..|.|   :..||||:|.:| ...|:......|..
plant   584 EVFPEAANFTRLWVMSMDNNLFTGNIGKGFRSLPS---LNVLDISNNKLTGVIPSWIGERQGLFA 645

  Fly   788 LNLAHNQL-GSLQSHAFGDLEFLEILNVAHNNLTS----------------LRRRSFQG------ 829
            |.|::|.| |.:.:..| ::.:|::|:::.|.|:.                |:..:..|      
plant   646 LQLSNNMLEGEIPTSLF-NISYLQLLDLSSNRLSGDIPPHVSSIYHGAVLLLQNNNLSGVIPDTL 709

  Fly   830 LNSLQELDLSHNQLDQLQVEQFSNLRKLRILRINSNRLRA-LPREVFMNTRLEFLDIAENQLSVW 893
            |.::..|||.:|:|.. .:.:|.|.:.:.||.:..|.... :|.:....:.::.||::.|:.:..
plant   710 LLNVIVLDLRNNRLSG-NLPEFINTQNISILLLRGNNFTGQIPHQFCSLSNIQLLDLSNNKFNGS 773

  Fly   894 PVPAFTDIGFTLRSIQMSHNNLEYLDASMFINSQFLYDI----SLARNRI---TILPDNTFSFLN 951
            .....::..|.||....|:.                ||:    ..|::.:   ::|..:.|:.:|
plant   774 IPSCLSNTSFGLRKGDDSYR----------------YDVPSRFGTAKDPVYFESLLMIDEFNMVN 822

  Fly   952 NLTNLDLSQNPLVTTNLREVFVHTPRLRKLSLHHMGLYVLPPLKLPLLSYLDVSGNYLQELSP-- 1014
            . ||   ||.               ::...:.|....|:...||  ||..:|:|.|.|....|  
plant   823 E-TN---SQT---------------KIEFATKHRYDAYMGGNLK--LLFGMDLSENELSGEIPVE 866

  Fly  1015 LGSLRHLRHVNVSHNKLTNASCAAEHLPPSVRVLDLAHNPLRRITLHDLASLRHLAELNILDVKV 1079
            ||.|..|..:|:|||.|:.....:.....:|..|||:.|.|:......|..:..||..|:     
plant   867 LGGLVELEALNLSHNNLSGVILESFSGLKNVESLDLSFNRLQGPIPLQLTDMISLAVFNV----- 926

  Fly  1080 TNPQAFSKLRSLRKLHASSHANLGEIVARIPGLQQLRVHCLEPNIGQQLFAKLANNTKIRLLELY 1144
                              |:.||..||   |..:|......:...|..|              |.
plant   927 ------------------SYNNLSGIV---PQGRQFNTFETQSYFGNPL--------------LC 956

  Fly  1145 GSNVQTIAPDVFTGLSRSQRLQVKISHTRISDLPPGIFYALREVPHLSIDISHNRINALAADSFY 1209
            |.                                             |||||      .|:::|:
plant   957 GK---------------------------------------------SIDIS------CASNNFH 970

  Fly  1210 PNKS--------------YWDAVGTR-SIMGGLITSHNPLECECGLVWFGHWLRRW 1250
            |..:              ||..|... :|:.|::.|         |.:...|.|.|
plant   971 PTDNGVEADESTVDMESFYWSFVAAYVTILLGILAS---------LSFDSPWSRAW 1017

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4168NP_001285953.1 leucine-rich repeat 99..118 CDD:275380
LRR_8 121..181 CDD:290566 17/62 (27%)
LRR_RI 122..350 CDD:238064 60/244 (25%)
leucine-rich repeat 122..146 CDD:275380 5/21 (24%)
leucine-rich repeat 147..170 CDD:275380 5/28 (18%)
leucine-rich repeat 171..194 CDD:275380 6/22 (27%)
leucine-rich repeat 195..214 CDD:275380 4/18 (22%)
leucine-rich repeat 215..236 CDD:275380 3/22 (14%)
LRR_8 265..322 CDD:290566 20/67 (30%)
leucine-rich repeat 266..287 CDD:275380 7/28 (25%)
leucine-rich repeat 288..311 CDD:275380 8/24 (33%)
leucine-rich repeat 312..338 CDD:275380 9/26 (35%)
LRR_RI 315..546 CDD:238064 70/241 (29%)
leucine-rich repeat 339..365 CDD:275380 6/25 (24%)
LRR_8 365..424 CDD:290566 12/58 (21%)
leucine-rich repeat 366..388 CDD:275380 7/21 (33%)
leucine-rich repeat 389..412 CDD:275380 1/22 (5%)
LRR_8 413..470 CDD:290566 25/60 (42%)
leucine-rich repeat 414..436 CDD:275380 9/22 (41%)
leucine-rich repeat 437..459 CDD:275380 9/24 (38%)
leucine-rich repeat 460..483 CDD:275380 12/23 (52%)
LRR_8 482..545 CDD:290566 17/67 (25%)
leucine-rich repeat 484..510 CDD:275380 7/25 (28%)
leucine-rich repeat 511..534 CDD:275380 7/27 (26%)
leucine-rich repeat 535..589 CDD:275380 11/53 (21%)
LRR_RI 588..891 CDD:238064 81/348 (23%)
LRR_8 588..650 CDD:290566 16/70 (23%)
leucine-rich repeat 590..613 CDD:275380 4/22 (18%)
leucine-rich repeat 614..639 CDD:275380 6/33 (18%)
LRR_8 638..698 CDD:290566 16/59 (27%)
leucine-rich repeat 640..663 CDD:275380 6/22 (27%)
leucine-rich repeat 664..687 CDD:275380 4/22 (18%)
LRR_8 688..749 CDD:290566 22/72 (31%)
leucine-rich repeat 688..711 CDD:275380 10/30 (33%)
leucine-rich repeat 712..735 CDD:275380 8/22 (36%)
leucine-rich repeat 740..783 CDD:275380 11/47 (23%)
LRR_8 784..843 CDD:290566 18/81 (22%)
leucine-rich repeat 785..808 CDD:275380 7/23 (30%)
leucine-rich repeat 809..832 CDD:275380 7/44 (16%)
LRR_RI <827..1053 CDD:238064 54/241 (22%)
LRR_8 832..890 CDD:290566 14/58 (24%)
leucine-rich repeat 833..856 CDD:275380 7/22 (32%)
leucine-rich repeat 857..879 CDD:275380 4/22 (18%)
leucine-rich repeat 880..900 CDD:275380 3/19 (16%)
LRR_8 904..963 CDD:290566 13/65 (20%)
leucine-rich repeat 905..928 CDD:275380 3/22 (14%)
leucine-rich repeat 929..952 CDD:275380 5/29 (17%)
leucine-rich repeat 953..977 CDD:275380 4/23 (17%)
leucine-rich repeat 978..1020 CDD:275380 14/43 (33%)
LRR_8 1019..1074 CDD:290566 15/54 (28%)
leucine-rich repeat 1045..1068 CDD:275380 7/22 (32%)
leucine-rich repeat 1069..1090 CDD:275380 3/20 (15%)
leucine-rich repeat 1091..1114 CDD:275380 6/22 (27%)
leucine-rich repeat 1115..1161 CDD:275380 4/45 (9%)
leucine-rich repeat 1162..1190 CDD:275380 0/27 (0%)
RLP13NP_001322432.1 LRRNT_2 31..74 CDD:311940
PLN00113 <101..206 CDD:331614 32/147 (22%)
leucine-rich repeat 142..165 CDD:275380 7/38 (18%)
leucine-rich repeat 166..190 CDD:275380 6/31 (19%)
PLN00113 <180..259 CDD:331614 22/90 (24%)
leucine-rich repeat 191..218 CDD:275380 7/28 (25%)
leucine-rich repeat 219..267 CDD:275380 17/52 (33%)
PLN00113 238..>957 CDD:331614 214/903 (24%)
leucine-rich repeat 268..292 CDD:275380 6/25 (24%)
leucine-rich repeat 293..318 CDD:275380 7/37 (19%)
leucine-rich repeat 319..351 CDD:275380 9/31 (29%)
leucine-rich repeat 352..375 CDD:275380 9/24 (38%)
leucine-rich repeat 376..400 CDD:275380 12/23 (52%)
leucine-rich repeat 450..474 CDD:275380 8/44 (18%)
leucine-rich repeat 475..521 CDD:275380 13/66 (20%)
leucine-rich repeat 522..545 CDD:275380 10/46 (22%)
leucine-rich repeat 546..570 CDD:275380 10/30 (33%)
leucine-rich repeat 571..594 CDD:275380 9/25 (36%)
leucine-rich repeat 595..618 CDD:275380 3/22 (14%)
leucine-rich repeat 619..642 CDD:275380 7/22 (32%)
leucine-rich repeat 643..666 CDD:275380 7/23 (30%)
leucine-rich repeat 667..691 CDD:275380 4/23 (17%)
leucine-rich repeat 713..735 CDD:275380 7/22 (32%)
leucine-rich repeat 736..757 CDD:275380 4/20 (20%)
leucine-rich repeat 760..781 CDD:275380 3/20 (15%)
leucine-rich repeat 849..872 CDD:275380 9/22 (41%)
leucine-rich repeat 873..896 CDD:275380 6/22 (27%)
leucine-rich repeat 897..918 CDD:275380 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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