DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4168 and GSO1

DIOPT Version :9

Sequence 1:NP_001285953.1 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster
Sequence 2:NP_193747.2 Gene:GSO1 / 827760 AraportID:AT4G20140 Length:1249 Species:Arabidopsis thaliana


Alignment Length:998 Identity:248/998 - (24%)
Similarity:377/998 - (37%) Gaps:278/998 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   405 SAFEGLTETLEYLDLERNRLT-TVPVALSSLHHLKYLYLTSNQI-----SQLNNLPSFTENLRVL 463
            |.:.|..:.|.:|||..|.|. .:|.|||:|..|:.|:|.|||:     |||.:|    .|:|.|
plant    88 SPWFGRFDNLIHLDLSSNNLVGPIPTALSNLTSLESLFLFSNQLTGEIPSQLGSL----VNIRSL 148

  Fly   464 SLSGNNFSMIPVLGLKNYTQLSYLNMGYNSITDIPEGIFAVDSWGS--NLQTILLRNNKITHLHL 526
            .:..|..                       :.||||.:      |:  |||.:.|.:.::|....
plant   149 RIGDNEL-----------------------VGDIPETL------GNLVNLQMLALASCRLTGPIP 184

  Fly   527 GSFAGLEQIQEISLSFNDITIHHPLVFENVSRTLKILELSFAVFPARSLESLDPLDALLP----- 586
            .....|.::|.:.|..|.:....|....|.|        ...||.|..    :.|:..:|     
plant   185 SQLGRLVRVQSLILQDNYLEGPIPAELGNCS--------DLTVFTAAE----NMLNGTIPAELGR 237

  Fly   587 LSQLIWLGLDNNNLKQVSNESFAQMRELSYINLSFNQLKTL-PRGLFQSDAHSHLVEIDLSYNGL 650
            |..|..|.|.||:|.........:|.:|.|::|..|||:.| |:.|                   
plant   238 LENLEILNLANNSLTGEIPSQLGEMSQLQYLSLMANQLQGLIPKSL------------------- 283

  Fly   651 ERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNRLVNISHGAFTVLP----- 710
                    ..||:||||:|.:|.|.......|.|:..|..|.|:.|.|    .|:   ||     
plant   284 --------ADLGNLQTLDLSANNLTGEIPEEFWNMSQLLDLVLANNHL----SGS---LPKSICS 333

  Fly   711 ---NLAALDLMHNQLCSLSLKSFLYVSNTTTPLRLNVSHNHIA-SFYDELSSYMYIYQLDISHNH 771
               ||..|.|...|   ||.:..:.:|...:..:|::|:|.:| |..:.|...:.:..|.:.:|.
plant   334 NNTNLEQLVLSGTQ---LSGEIPVELSKCQSLKQLDLSNNSLAGSIPEALFELVELTDLYLHNNT 395

  Fly   772 V--TKSDSFTNLANTLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAHNNLTSLRRRSFQGLNSLQ 834
            :  |.|.|.:||.| |::|.|.||.|..........|..||:|.:..|..:....:......||:
plant   396 LEGTLSPSISNLTN-LQWLVLYHNNLEGKLPKEISALRKLEVLFLYENRFSGEIPQEIGNCTSLK 459

  Fly   835 ELDLSHNQLDQLQVEQFSNLRKLRILRINSNRL-RALPREVFMNTRLEFLDIAENQLSVWPVPAF 898
            .:|:..|..:.........|::|.:|.:..|.| ..||..:....:|..||:|:||||       
plant   460 MIDMFGNHFEGEIPPSIGRLKELNLLHLRQNELVGGLPASLGNCHQLNILDLADNQLS------- 517

  Fly   899 TDIGFTLRSIQMSHNNLEYLDASMFINSQFLYDISLARNRITILPDNTFSFLNNLTNLDLSQNPL 963
                   .||..|...|:.|:..|      ||:.||..|    |||:..| |.|||.::||.|.|
plant   518 -------GSIPSSFGFLKGLEQLM------LYNNSLQGN----LPDSLIS-LRNLTRINLSHNRL 564

  Fly   964 -----------------VTTN------------------LR----EVFVHTP----RLRKLSLHH 985
                             ||.|                  ||    ::....|    ::|:|||..
plant   565 NGTIHPLCGSSSYLSFDVTNNGFEDEIPLELGNSQNLDRLRLGKNQLTGKIPWTLGKIRELSLLD 629

  Fly   986 MGLYVLP---PLKLPL---LSYLDVSGNYLQELSP--LGSLRHLRHVNVSHNKLTNASCAAEHLP 1042
            |....|.   ||:|.|   |:::|::.|:|....|  ||.|..|..:.:|.|:.      .|.||
plant   630 MSSNALTGTIPLQLVLCKKLTHIDLNNNFLSGPIPPWLGKLSQLGELKLSSNQF------VESLP 688

  Fly  1043 ------PSVRVLDLAHNPLRRITLHDLASLRHLAELNILDVKVTN-----PQAFSKLRSLRKLHA 1096
                  ..:.||.|..|.|......::.   :|..||:|::....     |||..||..|.:|..
plant   689 TELFNCTKLLVLSLDGNSLNGSIPQEIG---NLGALNVLNLDKNQFSGSLPQAMGKLSKLYELRL 750

  Fly  1097 SSHANLGEIVARIPGLQQLRVHCLEPNIGQQLFAKLANNTKIRLLELYGSNVQTIAPDVFTGLSR 1161
            |.::..|||...|..||.|:                      ..|:|..:|.....|.....||:
plant   751 SRNSLTGEIPVEIGQLQDLQ----------------------SALDLSYNNFTGDIPSTIGTLSK 793

  Fly  1162 SQRLQVKISHTRISDLPPGIFYALREVPHLSIDISHNRINALAADSFYPNKSYWDAVGTRSIMGG 1226
            .:.|.  :||.:::...||....::.:.:|  ::|.|.:.......|    |.|.|   .|.:|.
plant   794 LETLD--LSHNQLTGEVPGSVGDMKSLGYL--NVSFNNLGGKLKKQF----SRWPA---DSFLGN 847

  Fly  1227 LITSHNPLECECGLVWFGHWLRRWLRESAQIKVIQKDDLKRMVQRARANTCHDPTSGRHLPILEI 1291
            .....:||. .|                               .|.|:|......|.|.:.|:..
plant   848 TGLCGSPLS-RC-------------------------------NRVRSNNKQQGLSARSVVIISA 880

  Fly  1292 FPEDLLCQASALSSSGQRIFLLS 1314
            .        |||::.|..|.:::
plant   881 I--------SALTAIGLMILVIA 895

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4168NP_001285953.1 leucine-rich repeat 99..118 CDD:275380
LRR_8 121..181 CDD:290566
LRR_RI 122..350 CDD:238064
leucine-rich repeat 122..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..194 CDD:275380
leucine-rich repeat 195..214 CDD:275380
leucine-rich repeat 215..236 CDD:275380
LRR_8 265..322 CDD:290566
leucine-rich repeat 266..287 CDD:275380
leucine-rich repeat 288..311 CDD:275380
leucine-rich repeat 312..338 CDD:275380
LRR_RI 315..546 CDD:238064 41/148 (28%)
leucine-rich repeat 339..365 CDD:275380
LRR_8 365..424 CDD:290566 7/18 (39%)
leucine-rich repeat 366..388 CDD:275380
leucine-rich repeat 389..412 CDD:275380 2/6 (33%)
LRR_8 413..470 CDD:290566 25/62 (40%)
leucine-rich repeat 414..436 CDD:275380 11/22 (50%)
leucine-rich repeat 437..459 CDD:275380 10/26 (38%)
leucine-rich repeat 460..483 CDD:275380 3/22 (14%)
LRR_8 482..545 CDD:290566 14/64 (22%)
leucine-rich repeat 484..510 CDD:275380 5/27 (19%)
leucine-rich repeat 511..534 CDD:275380 5/22 (23%)
leucine-rich repeat 535..589 CDD:275380 12/58 (21%)
LRR_RI 588..891 CDD:238064 85/315 (27%)
LRR_8 588..650 CDD:290566 16/62 (26%)
leucine-rich repeat 590..613 CDD:275380 7/22 (32%)
leucine-rich repeat 614..639 CDD:275380 9/25 (36%)
LRR_8 638..698 CDD:290566 15/59 (25%)
leucine-rich repeat 640..663 CDD:275380 1/22 (5%)
leucine-rich repeat 664..687 CDD:275380 9/22 (41%)
LRR_8 688..749 CDD:290566 19/68 (28%)
leucine-rich repeat 688..711 CDD:275380 8/30 (27%)
leucine-rich repeat 712..735 CDD:275380 6/22 (27%)
leucine-rich repeat 740..783 CDD:275380 13/45 (29%)
LRR_8 784..843 CDD:290566 15/58 (26%)
leucine-rich repeat 785..808 CDD:275380 7/22 (32%)
leucine-rich repeat 809..832 CDD:275380 4/22 (18%)
LRR_RI <827..1053 CDD:238064 75/283 (27%)
LRR_8 832..890 CDD:290566 16/58 (28%)
leucine-rich repeat 833..856 CDD:275380 4/22 (18%)
leucine-rich repeat 857..879 CDD:275380 6/22 (27%)
leucine-rich repeat 880..900 CDD:275380 8/19 (42%)
LRR_8 904..963 CDD:290566 22/58 (38%)
leucine-rich repeat 905..928 CDD:275380 6/22 (27%)
leucine-rich repeat 929..952 CDD:275380 10/22 (45%)
leucine-rich repeat 953..977 CDD:275380 12/66 (18%)
leucine-rich repeat 978..1020 CDD:275380 18/49 (37%)
LRR_8 1019..1074 CDD:290566 13/60 (22%)
leucine-rich repeat 1045..1068 CDD:275380 5/22 (23%)
leucine-rich repeat 1069..1090 CDD:275380 9/25 (36%)
leucine-rich repeat 1091..1114 CDD:275380 8/22 (36%)
leucine-rich repeat 1115..1161 CDD:275380 6/45 (13%)
leucine-rich repeat 1162..1190 CDD:275380 5/27 (19%)
GSO1NP_193747.2 LRRNT_2 23..66 CDD:285463
PLN00113 25..1235 CDD:215061 248/998 (25%)
leucine-rich repeat 73..96 CDD:275380 2/7 (29%)
leucine-rich repeat 97..120 CDD:275380 11/22 (50%)
leucine-rich repeat 121..144 CDD:275380 10/26 (38%)
leucine-rich repeat 145..168 CDD:275380 8/51 (16%)
leucine-rich repeat 169..192 CDD:275380 5/22 (23%)
leucine-rich repeat 193..240 CDD:275380 12/58 (21%)
leucine-rich repeat 217..237 CDD:275380 5/23 (22%)
LRR_RI 238..442 CDD:238064 68/241 (28%)
leucine-rich repeat 241..264 CDD:275380 7/22 (32%)
leucine-rich repeat 265..288 CDD:275380 10/49 (20%)
LRR_8 288..348 CDD:290566 22/69 (32%)
leucine-rich repeat 289..312 CDD:275380 9/22 (41%)
leucine-rich repeat 313..337 CDD:275380 8/30 (27%)
leucine-rich repeat 338..361 CDD:275380 7/25 (28%)
leucine-rich repeat 362..385 CDD:275380 6/22 (27%)
leucine-rich repeat 386..409 CDD:275380 7/22 (32%)
leucine-rich repeat 410..433 CDD:275380 7/22 (32%)
leucine-rich repeat 434..457 CDD:275380 4/22 (18%)
leucine-rich repeat 458..481 CDD:275380 4/22 (18%)
leucine-rich repeat 482..505 CDD:275380 6/22 (27%)
leucine-rich repeat 506..527 CDD:275380 11/34 (32%)
leucine-rich repeat 530..553 CDD:275380 12/33 (36%)
leucine-rich repeat 601..624 CDD:275380 3/22 (14%)
leucine-rich repeat 625..648 CDD:275380 9/22 (41%)
LRR_RI 649..843 CDD:238064 56/235 (24%)
leucine-rich repeat 649..672 CDD:275380 8/22 (36%)
leucine-rich repeat 673..696 CDD:275380 6/28 (21%)
leucine-rich repeat 697..720 CDD:275380 6/25 (24%)
leucine-rich repeat 721..744 CDD:275380 8/22 (36%)
leucine-rich repeat 745..768 CDD:275380 8/22 (36%)
leucine-rich repeat 769..793 CDD:275380 6/45 (13%)
leucine-rich repeat 818..838 CDD:275380 4/25 (16%)
PKc_like 957..1230 CDD:304357
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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